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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182610543
OJJW01000001
313363
Bacteroidota
GAA
Phe
>WENV182610548
OJJW01000002
95987
Bacteroidota
CAA
Leu
>WENV182610546
OJJW01000002
313363
Bacteroidota
GAA
Phe
>WENV182610553
OJJW01000003
394247
Bacteroidota
CTC
Glu
>WENV182610552
OJJW01000003
394247
Bacteroidota
CTC
Glu
>WENV182610555
OJJW01000004
413663
Bacteroidota
CTG
Gln
>WENV182610554
OJJW01000004
413663
Bacteroidota
CTG
Gln
>WENV182610571
OJJW01000008
412479
Bacteroidota
TTG
Gln
>WENV182610569
OJJW01000008
37076
Bacteroidota
TAA
Leu
>WENV182610576
OJJW01000010
97336
Bacteroidota
CAG
Leu
>WENV182610597
OJJW01000020
339412
Bacteroidota
GGT
Thr
>WENV182610598
OJJW01000020
237797
Bacteroidota
CCA
Trp
>WENV182610602
OJJW01000024
147147
Bacteroidota
GTG
His
>WENV182610601
OJJW01000024
147147
Bacteroidota
GTG
His
>WENV182610639
OJJW01000047
141635
Bacteroidota
TAC
Val
>WENV182610638
OJJW01000047
136244
Bacteroidota
TAC
Val
>WENV182610663
OJJW01000085
301449
Bacteroidota
CGG
Pro
>WENV182610664
OJJW01000088
436206
Bacteroidota
TTG
Gln
>WENV182610676
OJJW01000094
196394
Bacteroidota
GTC
Asp
>WENV182610675
OJJW01000094
196394
Bacteroidota
GTC
Asp
>WENV182610674
OJJW01000094
196394
Bacteroidota
GTC
Asp
>WENV182610696
OJJW01000136
16224
Bacteroidota
GGA
Ser
>WENV182610709
OJJW01000176
235207
Bacteroidota
CAT
Met
>WENV182610714
OJJW01000199
16220
Bacteroidota
GGA
Ser
>WENV182610755
OJJW01000439
235102
Bacteroidota
CGT
Thr
>WENV182610798
OJJW01000557
80607
Bacteroidota
GTA
Tyr
>WENV182610801
OJJW01000605
56823
Bacteroidota
TGA
Ser
>WENV182610802
OJJW01000637
193809
Bacteroidota
CAT
Met
>WENV182610824
OJJW01000854
235097
Bacteroidota
TTT
Lys
>WENV182610834
OJJW01000990
144590
Bacteroidota
GTT
Asn
>WENV182610833
OJJW01000990
144590
Bacteroidota
GTT
Asn
>WENV182610836
OJJW01000997
338124
Bacteroidota
CCG
Arg
>WENV182610844
OJJW01001051
80607
Bacteroidota
GTA
Tyr
>WENV182610850
OJJW01001113
144655
Bacteroidota
GGC
Ala
>WENV182610863
OJJW01001307
338132
Bacteroidota
GCA
Cys
>WENV182610869
OJJW01001361
44852
Bacteroidota
TAA
Leu
>WENV182610870
OJJW01001397
141414
Bacteroidota
GGG
Pro
>WENV182610909
OJJW01002269
95559
Bacteroidota
TAG
Leu
>WENV182610968
OJJW01005188
56823
Bacteroidota
TGA
Ser
>WENV182610988
OJJW01007182
80607
Bacteroidota
GTA
Tyr
>WENV182611031
OJJW01010749
175704
Bacteroidota
TGC
Ala
>WENV182611057
OJJW01012669
436206
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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