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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182679018
OJNT01000005
154643
Bacteroidota
CAT
Met
>WENV182679014
OJNT01000005
353927
Bacteroidota
TTC
Glu
>WENV182679042
OJNT01000021
144933
Bacteroidota
TCT
Arg
>WENV182679081
OJNT01000056
338125
Bacteroidota
CCT
Arg
>WENV182679110
OJNT01000090
144657
Bacteroidota
CGG
Pro
>WENV182679136
OJNT01000133
95875
Bacteroidota
TAG
Leu
>WENV182679139
OJNT01000136
80614
Bacteroidota
>WENV182679195
OJNT01000224
243025
Bacteroidota
CAT
Met
>WENV182679216
OJNT01000278
338124
Bacteroidota
CCG
Arg
>WENV182679239
OJNT01000332
80607
Bacteroidota
GTA
Tyr
>WENV182679249
OJNT01000363
235207
Bacteroidota
CAT
Met
>WENV182679267
OJNT01000388
16224
Bacteroidota
GGA
Ser
>WENV182679269
OJNT01000394
144655
Bacteroidota
GGC
Ala
>WENV182679290
OJNT01000454
48053
Bacteroidota
TGA
Ser
>WENV182679312
OJNT01000515
243025
Bacteroidota
CAT
Met
>WENV182679359
OJNT01000665
235129
Bacteroidota
GCC
Gly
>WENV182679357
OJNT01000665
235129
Bacteroidota
GCC
Gly
>WENV182679372
OJNT01000695
95559
Bacteroidota
TAG
Leu
>WENV182679374
OJNT01000704
415410
Bacteroidota
TTG
Gln
>WENV182679393
OJNT01000804
154643
Bacteroidota
CAT
Met
>WENV182679399
OJNT01000834
16220
Bacteroidota
GGA
Ser
>WENV182679410
OJNT01000878
338486
Bacteroidota
CAT
Met
>WENV182679432
OJNT01000990
338486
Bacteroidota
CAT
Met
>WENV182679465
OJNT01001211
235203
Bacteroidota
TTT
Lys
>WENV182679507
OJNT01001544
415410
Bacteroidota
TTG
Gln
>WENV182679508
OJNT01001555
48053
Bacteroidota
TGA
Ser
>WENV182679517
OJNT01001614
414426
Bacteroidota
CTG
Gln
>WENV182679518
OJNT01001647
419272
Bacteroidota
CTG
Gln
>WENV182679525
OJNT01001686
343138
Bacteroidota
CCT
Arg
>WENV182679524
OJNT01001686
338164
Bacteroidota
TTC
Glu
>WENV182679579
OJNT01002432
150485
Bacteroidota
GTT
Asn
>WENV182679582
OJNT01002471
411550
Bacteroidota
CTG
Gln
>WENV182679586
OJNT01002511
240012
Bacteroidota
CCC
Gly
>WENV182679611
OJNT01002829
344692
Bacteroidota
GGT
Thr
>WENV182679627
OJNT01003054
339341
Bacteroidota
GGT
Thr
>WENV182679626
OJNT01003054
80614
Bacteroidota
>WENV182679637
OJNT01003216
411629
Bacteroidota
TTG
Gln
>WENV182679647
OJNT01003292
147439
Bacteroidota
TCT
Arg
>WENV182679651
OJNT01003320
341950
Bacteroidota
>WENV182679653
OJNT01003347
338132
Bacteroidota
GCA
Cys
>WENV182679658
OJNT01003430
17323
Bacteroidota
GGA
Ser
>WENV182679661
OJNT01003497
238121
Bacteroidota
CTT
Lys
>WENV182679660
OJNT01003497
238121
Bacteroidota
CTT
Lys
>WENV182679664
OJNT01003538
80835
Bacteroidota
GTA
Tyr
>WENV182679686
OJNT01004024
59689
Bacteroidota
CAG
Leu
>WENV182679719
OJNT01004516
149691
Bacteroidota
GTT
Asn
>WENV182679718
OJNT01004516
149691
Bacteroidota
GTT
Asn
>WENV182679728
OJNT01004653
235102
Bacteroidota
CGT
Thr
>WENV182679731
OJNT01004695
126641
Bacteroidota
TAC
Val
>WENV182679749
OJNT01005317
144659
Bacteroidota
GTG
His
>WENV182679754
OJNT01005405
235165
Bacteroidota
CCA
Trp
>WENV182679764
OJNT01005618
144656
Bacteroidota
GTG
His
>WENV182679766
OJNT01005693
17323
Bacteroidota
GGA
Ser
>WENV182679794
OJNT01006865
144639
Bacteroidota
GGC
Ala
>WENV182679802
OJNT01007109
353927
Bacteroidota
TTC
Glu
>WENV182679836
OJNT01008553
338486
Bacteroidota
CAT
Met
>WENV182679846
OJNT01009132
168744
Bacteroidota
GTG
His
>WENV182679914
OJNT01013759
46165
Bacteroidota
TGA
Ser
>WENV182679956
OJNT01018462
235180
Bacteroidota
CCA
Trp
>WENV182680005
OJNT01023386
58714
Bacteroidota
CAA
Leu
>WENV182680051
OJNT01031557
145504
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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