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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182688285
OJOB01000037
117741
Bacteroidota
TAG
Leu
>WENV182688567
OJOB01003460
398829
Bacteroidota
CCT
Arg
>WENV182688604
OJOB01006800
175904
Bacteroidota
CGG
Pro
>WENV182688554
OJOB01002427
289031
Bacteroidota
CAT
Met
>WENV182688276
OJOB01000027
280557
Bacteroidota
CAT
Met
>WENV182688296
OJOB01000048
280557
Bacteroidota
CAT
Met
>WENV182688471
OJOB01000719
20206
Bacteroidota
GGA
Ser
>WENV182688577
OJOB01003815
483416
Bacteroidota
CTG
Gln
>WENV182688406
OJOB01000261
175903
Bacteroidota
GTG
His
>WENV182688415
OJOB01000324
118089
Bacteroidota
TAG
Leu
>WENV182688583
OJOB01004385
203954
Bacteroidota
GTC
Asp
>WENV182688608
OJOB01007955
178133
Bacteroidota
GAT
Ile
>WENV182688357
OJOB01000137
56072
Bacteroidota
TAA
Leu
>WENV182688358
OJOB01000141
57807
Bacteroidota
TGA
Ser
>WENV182688458
OJOB01000545
57807
Bacteroidota
TGA
Ser
>WENV182688550
OJOB01002327
57807
Bacteroidota
TGA
Ser
>WENV182688551
OJOB01002333
175902
Bacteroidota
GGC
Ala
>WENV182688476
OJOB01000787
398860
Bacteroidota
CTC
Glu
>WENV182688603
OJOB01006769
280451
Bacteroidota
CGT
Thr
>WENV182688513
OJOB01001281
99847
Bacteroidota
GTA
Tyr
>WENV182688614
OJOB01008916
99847
Bacteroidota
GTA
Tyr
>WENV182688433
OJOB01000417
399200
Bacteroidota
CAT
Met
>WENV182688548
OJOB01002289
186874
Bacteroidota
CAT
Met
>WENV182688360
OJOB01000147
332896
Bacteroidota
TTT
Lys
>WENV182688510
OJOB01001271
332896
Bacteroidota
TTT
Lys
>WENV182688380
OJOB01000187
488746
Bacteroidota
CTG
Gln
>WENV182688460
OJOB01000566
280478
Bacteroidota
GCC
Gly
>WENV182688618
OJOB01010404
280478
Bacteroidota
GCC
Gly
>WENV182688307
OJOB01000072
158068
Bacteroidota
GGG
Pro
>WENV182688387
OJOB01000211
158068
Bacteroidota
GGG
Pro
>WENV182688424
OJOB01000371
158068
Bacteroidota
GGG
Pro
>WENV182688574
OJOB01003615
158068
Bacteroidota
GGG
Pro
>WENV182688369
OJOB01000165
398828
Bacteroidota
CCG
Arg
>WENV182688297
OJOB01000055
280446
Bacteroidota
TTT
Lys
>WENV182688317
OJOB01000094
280446
Bacteroidota
TTT
Lys
>WENV182688463
OJOB01000595
280446
Bacteroidota
TTT
Lys
>WENV182688271
OJOB01000020
484496
Bacteroidota
TTG
Gln
>WENV182688315
OJOB01000089
484496
Bacteroidota
TTG
Gln
>WENV182688430
OJOB01000404
484496
Bacteroidota
TTG
Gln
>WENV182688563
OJOB01003079
484496
Bacteroidota
TTG
Gln
>WENV182688557
OJOB01002569
285750
Bacteroidota
CCC
Gly
>WENV182688272
OJOB01000022
398836
Bacteroidota
GCA
Cys
>WENV182688335
OJOB01000115
398836
Bacteroidota
GCA
Cys
>WENV182688371
OJOB01000182
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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