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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182713131
OJPG01000009
414426
Bacteroidota
CTG
Gln
>WENV182713155
OJPG01000018
146800
Bacteroidota
>WENV182713157
OJPG01000019
243025
Bacteroidota
CAT
Met
>WENV182713163
OJPG01000020
46165
Bacteroidota
TGA
Ser
>WENV182713161
OJPG01000020
17323
Bacteroidota
GGA
Ser
>WENV182713162
OJPG01000020
344692
Bacteroidota
GGT
Thr
>WENV182713167
OJPG01000025
144656
Bacteroidota
GTG
His
>WENV182713186
OJPG01000040
342206
Bacteroidota
TTC
Glu
>WENV182713202
OJPG01000052
342206
Bacteroidota
TTC
Glu
>WENV182713205
OJPG01000056
235097
Bacteroidota
TTT
Lys
>WENV182713206
OJPG01000056
126965
Bacteroidota
GGG
Pro
>WENV182713235
OJPG01000094
155123
Bacteroidota
GTT
Asn
>WENV182713238
OJPG01000101
149691
Bacteroidota
GTT
Asn
>WENV182713240
OJPG01000105
344692
Bacteroidota
GGT
Thr
>WENV182713261
OJPG01000120
144596
Bacteroidota
GGC
Ala
>WENV182713267
OJPG01000129
44852
Bacteroidota
TAA
Leu
>WENV182713283
OJPG01000169
154643
Bacteroidota
CAT
Met
>WENV182713348
OJPG01000262
243025
Bacteroidota
CAT
Met
>WENV182713376
OJPG01000307
243025
Bacteroidota
CAT
Met
>WENV182713401
OJPG01000377
126966
Bacteroidota
TAC
Val
>WENV182713405
OJPG01000393
24174
Bacteroidota
GCT
Ser
>WENV182713421
OJPG01000437
341950
Bacteroidota
>WENV182713462
OJPG01000552
17323
Bacteroidota
GGA
Ser
>WENV182713514
OJPG01000715
235097
Bacteroidota
TTT
Lys
>WENV182713521
OJPG01000731
338125
Bacteroidota
CCT
Arg
>WENV182713552
OJPG01000850
154643
Bacteroidota
CAT
Met
>WENV182713564
OJPG01000930
155123
Bacteroidota
GTT
Asn
>WENV182713615
OJPG01001231
414426
Bacteroidota
CTG
Gln
>WENV182713630
OJPG01001298
58714
Bacteroidota
CAA
Leu
>WENV182713631
OJPG01001305
95559
Bacteroidota
TAG
Leu
>WENV182713640
OJPG01001412
235207
Bacteroidota
CAT
Met
>WENV182713667
OJPG01001654
415410
Bacteroidota
TTG
Gln
>WENV182713670
OJPG01001667
338132
Bacteroidota
GCA
Cys
>WENV182713674
OJPG01001683
144656
Bacteroidota
GTG
His
>WENV182713695
OJPG01001915
80835
Bacteroidota
GTA
Tyr
>WENV182713702
OJPG01001965
146530
Bacteroidota
TGT
Thr
>WENV182713722
OJPG01002169
415410
Bacteroidota
TTG
Gln
>WENV182713784
OJPG01003735
126641
Bacteroidota
TAC
Val
>WENV182713785
OJPG01003830
16220
Bacteroidota
GGA
Ser
>WENV182713805
OJPG01004245
80607
Bacteroidota
GTA
Tyr
>WENV182713818
OJPG01004877
235129
Bacteroidota
GCC
Gly
>WENV182713830
OJPG01005340
147439
Bacteroidota
TCT
Arg
>WENV182713836
OJPG01005500
240012
Bacteroidota
CCC
Gly
>WENV182713881
OJPG01007405
338124
Bacteroidota
CCG
Arg
>WENV182713896
OJPG01007757
411543
Bacteroidota
CTG
Gln
>WENV182713911
OJPG01008637
338132
Bacteroidota
GCA
Cys
>WENV182713914
OJPG01008845
144596
Bacteroidota
GGC
Ala
>WENV182713935
OJPG01010911
95875
Bacteroidota
TAG
Leu
>WENV182713948
OJPG01011787
235180
Bacteroidota
CCA
Trp
>WENV182713989
OJPG01015919
151960
Bacteroidota
GGC
Ala
>WENV182714032
OJPG01023257
153993
Bacteroidota
GAT
Ile
>WENV182714039
OJPG01024183
144933
Bacteroidota
TCT
Arg
>WENV182714093
OJPG01041488
144657
Bacteroidota
CGG
Pro
>WENV182714110
OJPG01047300
235817
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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