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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182725273
OJPT01000314
172207
Bacteroidota
GGG
Pro
>WENV182725303
OJPT01000466
172207
Bacteroidota
GGG
Pro
>WENV182725472
OJPT01001993
172207
Bacteroidota
GGG
Pro
>WENV182725577
OJPT01005530
172207
Bacteroidota
GGG
Pro
>WENV182725219
OJPT01000091
117741
Bacteroidota
TAG
Leu
>WENV182725177
OJPT01000044
398829
Bacteroidota
CCT
Arg
>WENV182725754
OJPT01016269
398829
Bacteroidota
CCT
Arg
>WENV182725677
OJPT01009610
175838
Bacteroidota
GTT
Asn
>WENV182725447
OJPT01001628
175904
Bacteroidota
CGG
Pro
>WENV182725778
OJPT01019134
175904
Bacteroidota
CGG
Pro
>WENV182725548
OJPT01004281
289031
Bacteroidota
CAT
Met
>WENV182725282
OJPT01000347
280553
Bacteroidota
TTT
Lys
>WENV182725163
OJPT01000037
280557
Bacteroidota
CAT
Met
>WENV182725164
OJPT01000037
280557
Bacteroidota
CAT
Met
>WENV182725192
OJPT01000057
280557
Bacteroidota
CAT
Met
>WENV182725288
OJPT01000383
280557
Bacteroidota
CAT
Met
>WENV182725388
OJPT01001108
20492
Bacteroidota
GGA
Ser
>WENV182725504
OJPT01003007
20206
Bacteroidota
GGA
Ser
>WENV182725510
OJPT01003260
483416
Bacteroidota
CTG
Gln
>WENV182725254
OJPT01000170
398871
Bacteroidota
TTC
Glu
>WENV182725146
OJPT01000023
56493
Bacteroidota
TGA
Ser
>WENV182725246
OJPT01000142
56493
Bacteroidota
TGA
Ser
>WENV182725405
OJPT01001279
175906
Bacteroidota
GTG
His
>WENV182725124
OJPT01000010
351598
Bacteroidota
CGG
Pro
>WENV182725294
OJPT01000423
351598
Bacteroidota
CGG
Pro
>WENV182725515
OJPT01003326
118089
Bacteroidota
TAG
Leu
>WENV182725289
OJPT01000388
203954
Bacteroidota
GTC
Asp
>WENV182725863
OJPT01036035
203954
Bacteroidota
GTC
Asp
>WENV182725494
OJPT01002571
178907
Bacteroidota
TCT
Arg
>WENV182725180
OJPT01000047
405877
Bacteroidota
GGT
Thr
>WENV182725357
OJPT01000738
405877
Bacteroidota
GGT
Thr
>WENV182725582
OJPT01005787
29791
Bacteroidota
GCT
Ser
>WENV182725139
OJPT01000017
182267
Bacteroidota
GTT
Asn
>WENV182725140
OJPT01000017
182267
Bacteroidota
GTT
Asn
>WENV182725516
OJPT01003333
20449
Bacteroidota
GGA
Ser
>WENV182725286
OJPT01000375
21127
Bacteroidota
GGA
Ser
>WENV182725270
OJPT01000293
56072
Bacteroidota
TAA
Leu
>WENV182725371
OJPT01000903
56072
Bacteroidota
TAA
Leu
>WENV182725583
OJPT01005787
398860
Bacteroidota
CTC
Glu
>WENV182725542
OJPT01004095
480404
Bacteroidota
TTG
Gln
>WENV182725484
OJPT01002392
280451
Bacteroidota
CGT
Thr
>WENV182725173
OJPT01000042
418894
Bacteroidota
TTC
Glu
>WENV182725559
OJPT01004766
99847
Bacteroidota
GTA
Tyr
>WENV182725569
OJPT01005035
99847
Bacteroidota
GTA
Tyr
>WENV182725647
OJPT01008839
99847
Bacteroidota
GTA
Tyr
>WENV182725265
OJPT01000250
399200
Bacteroidota
CAT
Met
>WENV182725402
OJPT01001264
399200
Bacteroidota
CAT
Met
>WENV182725451
OJPT01001713
399200
Bacteroidota
CAT
Met
>WENV182725697
OJPT01011859
399200
Bacteroidota
CAT
Met
>WENV182725406
OJPT01001297
186874
Bacteroidota
CAT
Met
>WENV182725378
OJPT01001005
488746
Bacteroidota
CTG
Gln
>WENV182725283
OJPT01000366
280478
Bacteroidota
GCC
Gly
>WENV182725285
OJPT01000366
280478
Bacteroidota
GCC
Gly
>WENV182725428
OJPT01001477
280478
Bacteroidota
GCC
Gly
>WENV182725587
OJPT01005840
175844
Bacteroidota
GGC
Ala
>WENV182725227
OJPT01000111
398828
Bacteroidota
CCG
Arg
>WENV182725278
OJPT01000325
398828
Bacteroidota
CCG
Arg
>WENV182725546
OJPT01004179
74084
Bacteroidota
CAG
Leu
>WENV182725536
OJPT01003806
159415
Bacteroidota
TAC
Val
>WENV182725626
OJPT01007928
480325
Bacteroidota
CTG
Gln
>WENV182725215
OJPT01000083
176192
Bacteroidota
TCT
Arg
>WENV182725862
OJPT01036034
400088
Bacteroidota
GGT
Thr
>WENV182725147
OJPT01000026
69204
Bacteroidota
TGA
Ser
>WENV182725549
OJPT01004420
69204
Bacteroidota
TGA
Ser
>WENV182725650
OJPT01008905
69204
Bacteroidota
TGA
Ser
>WENV182725714
OJPT01013567
69204
Bacteroidota
TGA
Ser
>WENV182725818
OJPT01025436
69204
Bacteroidota
TGA
Ser
>WENV182725101
OJPT01000002
27502
Bacteroidota
GGA
Ser
>WENV182725352
OJPT01000720
27502
Bacteroidota
GGA
Ser
>WENV182725620
OJPT01007521
285750
Bacteroidota
CCC
Gly
>WENV182725768
OJPT01018724
373714
Bacteroidota
GCC
Gly
>WENV182725107
OJPT01000003
365112
Bacteroidota
TTT
Lys
>WENV182725415
OJPT01001374
365112
Bacteroidota
TTT
Lys
>WENV182725435
OJPT01001505
365112
Bacteroidota
TTT
Lys
>WENV182725566
OJPT01004947
365112
Bacteroidota
TTT
Lys
>WENV182725642
OJPT01008325
365112
Bacteroidota
TTT
Lys
>WENV182725755
OJPT01016480
365112
Bacteroidota
TTT
Lys
>WENV182725807
OJPT01023298
365112
Bacteroidota
TTT
Lys
>WENV182725171
OJPT01000039
398836
Bacteroidota
GCA
Cys
>WENV182725240
OJPT01000135
398836
Bacteroidota
GCA
Cys
>WENV182725499
OJPT01002760
398836
Bacteroidota
GCA
Cys
>WENV182725500
OJPT01002766
398836
Bacteroidota
GCA
Cys
>WENV182725530
OJPT01003644
398836
Bacteroidota
GCA
Cys
>WENV182725771
OJPT01018882
398836
Bacteroidota
GCA
Cys
>WENV182725765
OJPT01018314
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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