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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182757236
OJRH01000612
117741
Bacteroidota
TAG
Leu
>WENV182757152
OJRH01000269
398829
Bacteroidota
CCT
Arg
>WENV182757165
OJRH01000283
404226
Bacteroidota
CCT
Arg
>WENV182757160
OJRH01000280
175904
Bacteroidota
CGG
Pro
>WENV182757121
OJRH01000153
400161
Bacteroidota
GGT
Thr
>WENV182757472
OJRH01005711
289031
Bacteroidota
CAT
Met
>WENV182756999
OJRH01000001
280553
Bacteroidota
TTT
Lys
>WENV182757004
OJRH01000004
280553
Bacteroidota
TTT
Lys
>WENV182757270
OJRH01000984
280557
Bacteroidota
CAT
Met
>WENV182757359
OJRH01002238
483416
Bacteroidota
CTG
Gln
>WENV182757164
OJRH01000283
398871
Bacteroidota
TTC
Glu
>WENV182757123
OJRH01000160
118221
Bacteroidota
CAA
Leu
>WENV182757038
OJRH01000030
175906
Bacteroidota
GTG
His
>WENV182757039
OJRH01000030
175906
Bacteroidota
GTG
His
>WENV182757844
OJRH01049334
175903
Bacteroidota
GTG
His
>WENV182757126
OJRH01000172
351598
Bacteroidota
CGG
Pro
>WENV182757177
OJRH01000328
118089
Bacteroidota
TAG
Leu
>WENV182757340
OJRH01001945
118089
Bacteroidota
TAG
Leu
>WENV182757161
OJRH01000280
280530
Bacteroidota
CCA
Trp
>WENV182757001
OJRH01000002
203954
Bacteroidota
GTC
Asp
>WENV182757071
OJRH01000080
157895
Bacteroidota
TAC
Val
>WENV182757072
OJRH01000080
157895
Bacteroidota
TAC
Val
>WENV182757035
OJRH01000028
178907
Bacteroidota
TCT
Arg
>WENV182757060
OJRH01000051
56385
Bacteroidota
TGA
Ser
>WENV182757112
OJRH01000137
20449
Bacteroidota
GGA
Ser
>WENV182757133
OJRH01000198
20449
Bacteroidota
GGA
Ser
>WENV182757122
OJRH01000153
312035
Bacteroidota
CCA
Trp
>WENV182757795
OJRH01036180
178133
Bacteroidota
GAT
Ile
>WENV182757162
OJRH01000281
242241
Bacteroidota
GTC
Asp
>WENV182757163
OJRH01000281
242241
Bacteroidota
GTC
Asp
>WENV182757430
OJRH01004217
57807
Bacteroidota
TGA
Ser
>WENV182757448
OJRH01005362
280451
Bacteroidota
CGT
Thr
>WENV182757633
OJRH01014350
99847
Bacteroidota
GTA
Tyr
>WENV182757002
OJRH01000003
399200
Bacteroidota
CAT
Met
>WENV182757601
OJRH01011846
399200
Bacteroidota
CAT
Met
>WENV182757149
OJRH01000264
404109
Bacteroidota
CTC
Glu
>WENV182757226
OJRH01000545
404109
Bacteroidota
CTC
Glu
>WENV182757600
OJRH01011737
186874
Bacteroidota
CAT
Met
>WENV182757481
OJRH01006082
189252
Bacteroidota
GGC
Ala
>WENV182757066
OJRH01000077
46648
Bacteroidota
TAA
Leu
>WENV182757100
OJRH01000125
118432
Bacteroidota
CAG
Leu
>WENV182757009
OJRH01000006
280478
Bacteroidota
GCC
Gly
>WENV182757040
OJRH01000032
280478
Bacteroidota
GCC
Gly
>WENV182757042
OJRH01000032
280478
Bacteroidota
GCC
Gly
>WENV182757351
OJRH01002036
280478
Bacteroidota
GCC
Gly
>WENV182757264
OJRH01000880
284236
Bacteroidota
CGG
Pro
>WENV182757370
OJRH01002463
20766
Bacteroidota
GGA
Ser
>WENV182757050
OJRH01000044
73011
Bacteroidota
CAA
Leu
>WENV182757259
OJRH01000820
178134
Bacteroidota
TGG
Pro
>WENV182757609
OJRH01012858
158068
Bacteroidota
GGG
Pro
>WENV182757166
OJRH01000289
398828
Bacteroidota
CCG
Arg
>WENV182757608
OJRH01012344
191205
Bacteroidota
TGG
Pro
>WENV182757010
OJRH01000006
74084
Bacteroidota
CAG
Leu
>WENV182757047
OJRH01000043
74084
Bacteroidota
CAG
Leu
>WENV182757007
OJRH01000005
480325
Bacteroidota
CTG
Gln
>WENV182757008
OJRH01000005
480325
Bacteroidota
CTG
Gln
>WENV182757068
OJRH01000077
481328
Bacteroidota
TTG
Gln
>WENV182757283
OJRH01001131
400088
Bacteroidota
GGT
Thr
>WENV182757193
OJRH01000399
484496
Bacteroidota
TTG
Gln
>WENV182757034
OJRH01000028
285750
Bacteroidota
CCC
Gly
>WENV182757312
OJRH01001478
285750
Bacteroidota
CCC
Gly
>WENV182757101
OJRH01000125
73509
Bacteroidota
GAG
Leu
>WENV182757056
OJRH01000050
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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