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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182765779
OJRT01000007
301449
Bacteroidota
CGG
Pro
>WENV182765798
OJRT01000013
414426
Bacteroidota
CTG
Gln
>WENV182765806
OJRT01000014
154643
Bacteroidota
CAT
Met
>WENV182765817
OJRT01000024
425638
Bacteroidota
CTG
Gln
>WENV182765822
OJRT01000026
353927
Bacteroidota
TTC
Glu
>WENV182765830
OJRT01000037
338132
Bacteroidota
GCA
Cys
>WENV182765829
OJRT01000037
16224
Bacteroidota
GGA
Ser
>WENV182765833
OJRT01000038
235207
Bacteroidota
CAT
Met
>WENV182765850
OJRT01000054
94703
Bacteroidota
GTA
Tyr
>WENV182765851
OJRT01000057
338125
Bacteroidota
CCT
Arg
>WENV182765868
OJRT01000073
411543
Bacteroidota
CTG
Gln
>WENV182765878
OJRT01000083
94703
Bacteroidota
GTA
Tyr
>WENV182765891
OJRT01000097
235207
Bacteroidota
CAT
Met
>WENV182765893
OJRT01000099
243025
Bacteroidota
CAT
Met
>WENV182765920
OJRT01000143
301449
Bacteroidota
CGG
Pro
>WENV182765921
OJRT01000145
80607
Bacteroidota
GTA
Tyr
>WENV182765926
OJRT01000153
338124
Bacteroidota
CCG
Arg
>WENV182765932
OJRT01000168
436206
Bacteroidota
TTG
Gln
>WENV182765944
OJRT01000218
143169
Bacteroidota
GGG
Pro
>WENV182765952
OJRT01000233
301449
Bacteroidota
CGG
Pro
>WENV182765978
OJRT01000314
144656
Bacteroidota
GTG
His
>WENV182765995
OJRT01000362
338132
Bacteroidota
GCA
Cys
>WENV182766023
OJRT01000489
16220
Bacteroidota
GGA
Ser
>WENV182766024
OJRT01000492
436206
Bacteroidota
TTG
Gln
>WENV182766054
OJRT01000634
338125
Bacteroidota
CCT
Arg
>WENV182766073
OJRT01000682
16224
Bacteroidota
GGA
Ser
>WENV182766109
OJRT01000951
235097
Bacteroidota
TTT
Lys
>WENV182766148
OJRT01001374
436206
Bacteroidota
TTG
Gln
>WENV182766154
OJRT01001405
143169
Bacteroidota
GGG
Pro
>WENV182766164
OJRT01001574
95559
Bacteroidota
TAG
Leu
>WENV182766174
OJRT01001779
94703
Bacteroidota
GTA
Tyr
>WENV182766180
OJRT01001831
56823
Bacteroidota
TGA
Ser
>WENV182766210
OJRT01002545
19317
Bacteroidota
GGA
Ser
>WENV182766212
OJRT01002600
238121
Bacteroidota
CTT
Lys
>WENV182766242
OJRT01003400
144596
Bacteroidota
GGC
Ala
>WENV182766244
OJRT01003460
44852
Bacteroidota
TAA
Leu
>WENV182766267
OJRT01003949
58715
Bacteroidota
GAG
Leu
>WENV182766304
OJRT01005137
235207
Bacteroidota
CAT
Met
>WENV182766336
OJRT01005704
80614
Bacteroidota
>WENV182766343
OJRT01006136
17323
Bacteroidota
GGA
Ser
>WENV182766350
OJRT01006261
235097
Bacteroidota
TTT
Lys
>WENV182766351
OJRT01006369
240012
Bacteroidota
CCC
Gly
>WENV182766359
OJRT01006605
154643
Bacteroidota
CAT
Met
>WENV182766379
OJRT01007331
56823
Bacteroidota
TGA
Ser
>WENV182766391
OJRT01007955
95618
Bacteroidota
TAG
Leu
>WENV182766401
OJRT01008602
301449
Bacteroidota
CGG
Pro
>WENV182766402
OJRT01008687
143169
Bacteroidota
GGG
Pro
>WENV182766407
OJRT01008799
80607
Bacteroidota
GTA
Tyr
>WENV182766514
OJRT01015134
95875
Bacteroidota
TAG
Leu
>WENV182766524
OJRT01016251
338486
Bacteroidota
CAT
Met
>WENV182766543
OJRT01018856
56823
Bacteroidota
TGA
Ser
>WENV182766577
OJRT01023948
344692
Bacteroidota
GGT
Thr
>WENV182766608
OJRT01030789
235102
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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