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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182793415
OJSP01000310
295385
Bacteroidota
CCA
Trp
>WENV182793467
OJSP01000397
285360
Bacteroidota
TTT
Lys
>WENV182793489
OJSP01000457
285360
Bacteroidota
TTT
Lys
>WENV182793518
OJSP01000512
398829
Bacteroidota
CCT
Arg
>WENV182794205
OJSP01005126
398829
Bacteroidota
CCT
Arg
>WENV182793433
OJSP01000346
404226
Bacteroidota
CCT
Arg
>WENV182794116
OJSP01003718
175904
Bacteroidota
CGG
Pro
>WENV182793570
OJSP01000637
289031
Bacteroidota
CAT
Met
>WENV182793627
OJSP01000822
289031
Bacteroidota
CAT
Met
>WENV182793816
OJSP01001601
289031
Bacteroidota
CAT
Met
>WENV182794185
OJSP01004734
289031
Bacteroidota
CAT
Met
>WENV182793655
OJSP01000922
280557
Bacteroidota
CAT
Met
>WENV182794421
OJSP01010772
20206
Bacteroidota
GGA
Ser
>WENV182793195
OJSP01000039
483416
Bacteroidota
CTG
Gln
>WENV182793533
OJSP01000550
483416
Bacteroidota
CTG
Gln
>WENV182794434
OJSP01011251
282712
Bacteroidota
TTT
Lys
>WENV182793434
OJSP01000346
398871
Bacteroidota
TTC
Glu
>WENV182793250
OJSP01000082
56493
Bacteroidota
TGA
Ser
>WENV182793555
OJSP01000608
56493
Bacteroidota
TGA
Ser
>WENV182793419
OJSP01000322
175906
Bacteroidota
GTG
His
>WENV182793538
OJSP01000563
175903
Bacteroidota
GTG
His
>WENV182793554
OJSP01000604
291612
Bacteroidota
>WENV182793780
OJSP01001413
291612
Bacteroidota
>WENV182794088
OJSP01003517
291612
Bacteroidota
>WENV182794117
OJSP01003718
280530
Bacteroidota
CCA
Trp
>WENV182793759
OJSP01001315
203954
Bacteroidota
GTC
Asp
>WENV182793486
OJSP01000448
178907
Bacteroidota
TCT
Arg
>WENV182793743
OJSP01001248
405877
Bacteroidota
GGT
Thr
>WENV182794385
OJSP01008906
405877
Bacteroidota
GGT
Thr
>WENV182793661
OJSP01000944
20449
Bacteroidota
GGA
Ser
>WENV182793959
OJSP01002459
21127
Bacteroidota
GGA
Ser
>WENV182793757
OJSP01001306
56072
Bacteroidota
TAA
Leu
>WENV182793776
OJSP01001393
56072
Bacteroidota
TAA
Leu
>WENV182793170
OJSP01000023
57807
Bacteroidota
TGA
Ser
>WENV182793179
OJSP01000027
57807
Bacteroidota
TGA
Ser
>WENV182793181
OJSP01000027
57807
Bacteroidota
TGA
Ser
>WENV182793459
OJSP01000382
57807
Bacteroidota
TGA
Ser
>WENV182793771
OJSP01001358
57807
Bacteroidota
TGA
Ser
>WENV182793804
OJSP01001511
57807
Bacteroidota
TGA
Ser
>WENV182793891
OJSP01002005
175902
Bacteroidota
GGC
Ala
>WENV182793284
OJSP01000117
398860
Bacteroidota
CTC
Glu
>WENV182793185
OJSP01000033
480404
Bacteroidota
TTG
Gln
>WENV182793253
OJSP01000086
280451
Bacteroidota
CGT
Thr
>WENV182793239
OJSP01000075
99847
Bacteroidota
GTA
Tyr
>WENV182793493
OJSP01000465
399200
Bacteroidota
CAT
Met
>WENV182793900
OJSP01002069
399200
Bacteroidota
CAT
Met
>WENV182793296
OJSP01000126
186874
Bacteroidota
CAT
Met
>WENV182794049
OJSP01003206
186874
Bacteroidota
CAT
Met
>WENV182794189
OJSP01004810
186874
Bacteroidota
CAT
Met
>WENV182793225
OJSP01000062
488746
Bacteroidota
CTG
Gln
>WENV182793511
OJSP01000498
280478
Bacteroidota
GCC
Gly
>WENV182793226
OJSP01000062
20766
Bacteroidota
GGA
Ser
>WENV182793421
OJSP01000325
20766
Bacteroidota
GGA
Ser
>WENV182793398
OJSP01000280
186108
Bacteroidota
GTT
Asn
>WENV182794180
OJSP01004627
186108
Bacteroidota
GTT
Asn
>WENV182793480
OJSP01000422
175844
Bacteroidota
GGC
Ala
>WENV182793772
OJSP01001363
175844
Bacteroidota
GGC
Ala
>WENV182794125
OJSP01003787
175844
Bacteroidota
GGC
Ala
>WENV182794186
OJSP01004750
73011
Bacteroidota
CAA
Leu
>WENV182794212
OJSP01005183
183889
Bacteroidota
GGC
Ala
>WENV182793190
OJSP01000036
480318
Bacteroidota
CTG
Gln
>WENV182793512
OJSP01000499
158068
Bacteroidota
GGG
Pro
>WENV182793818
OJSP01001611
158068
Bacteroidota
GGG
Pro
>WENV182794229
OJSP01005425
158068
Bacteroidota
GGG
Pro
>WENV182794295
OJSP01006574
158068
Bacteroidota
GGG
Pro
>WENV182794545
OJSP01015971
186142
Bacteroidota
GAT
Ile
>WENV182793609
OJSP01000778
398828
Bacteroidota
CCG
Arg
>WENV182794015
OJSP01002963
74084
Bacteroidota
CAG
Leu
>WENV182793344
OJSP01000189
159415
Bacteroidota
TAC
Val
>WENV182793345
OJSP01000189
159415
Bacteroidota
TAC
Val
>WENV182793346
OJSP01000189
159415
Bacteroidota
TAC
Val
>WENV182793820
OJSP01001621
480325
Bacteroidota
CTG
Gln
>WENV182793261
OJSP01000096
176192
Bacteroidota
TCT
Arg
>WENV182793366
OJSP01000221
280446
Bacteroidota
TTT
Lys
>WENV182793375
OJSP01000245
280446
Bacteroidota
TTT
Lys
>WENV182794006
OJSP01002888
295349
Bacteroidota
CCA
Trp
>WENV182793080
OJSP01000003
484496
Bacteroidota
TTG
Gln
>WENV182793224
OJSP01000060
484496
Bacteroidota
TTG
Gln
>WENV182793877
OJSP01001916
484496
Bacteroidota
TTG
Gln
>WENV182793976
OJSP01002578
484496
Bacteroidota
TTG
Gln
>WENV182794075
OJSP01003428
484496
Bacteroidota
TTG
Gln
>WENV182793487
OJSP01000448
285750
Bacteroidota
CCC
Gly
>WENV182793694
OJSP01001090
188555
Bacteroidota
CAT
Met
>WENV182794546
OJSP01015971
186143
Bacteroidota
TGC
Ala
>WENV182793171
OJSP01000023
398836
Bacteroidota
GCA
Cys
>WENV182793300
OJSP01000131
398836
Bacteroidota
GCA
Cys
>WENV182793378
OJSP01000249
398836
Bacteroidota
GCA
Cys
>WENV182793463
OJSP01000391
398836
Bacteroidota
GCA
Cys
>WENV182793504
OJSP01000484
398836
Bacteroidota
GCA
Cys
>WENV182793592
OJSP01000706
398836
Bacteroidota
GCA
Cys
>WENV182793647
OJSP01000893
398836
Bacteroidota
GCA
Cys
>WENV182793683
OJSP01001021
398836
Bacteroidota
GCA
Cys
>WENV182794074
OJSP01003396
398836
Bacteroidota
GCA
Cys
>WENV182794092
OJSP01003538
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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