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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182799443
OJTU01000006
181746
Bacteroidota
GGC
Ala
>WENV182799455
OJTU01000014
411543
Bacteroidota
CTG
Gln
>WENV182799456
OJTU01000014
139743
Bacteroidota
GGG
Pro
>WENV182799472
OJTU01000025
338165
Bacteroidota
GGT
Thr
>WENV182799477
OJTU01000032
19317
Bacteroidota
GGA
Ser
>WENV182799478
OJTU01000032
95618
Bacteroidota
TAG
Leu
>WENV182799480
OJTU01000034
301449
Bacteroidota
CGG
Pro
>WENV182799490
OJTU01000039
235182
Bacteroidota
>WENV182799494
OJTU01000045
338155
Bacteroidota
CTC
Glu
>WENV182799496
OJTU01000058
235207
Bacteroidota
CAT
Met
>WENV182799505
OJTU01000099
411629
Bacteroidota
TTG
Gln
>WENV182799506
OJTU01000103
144933
Bacteroidota
TCT
Arg
>WENV182799510
OJTU01000116
80607
Bacteroidota
GTA
Tyr
>WENV182799511
OJTU01000119
144688
Bacteroidota
CAT
Met
>WENV182799512
OJTU01000133
55270
Bacteroidota
TGA
Ser
>WENV182799513
OJTU01000163
338132
Bacteroidota
GCA
Cys
>WENV182799516
OJTU01000197
272983
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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