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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182861149
OKPD01000002
170323
Bacteroidota
GGG
Pro
>WENV182861150
OKPD01000002
365112
Bacteroidota
TTT
Lys
>WENV182861153
OKPD01000002
351598
Bacteroidota
CGG
Pro
>WENV182861173
OKPD01000007
229246
Bacteroidota
GGC
Ala
>WENV182861178
OKPD01000010
365112
Bacteroidota
TTT
Lys
>WENV182861183
OKPD01000013
99847
Bacteroidota
GTA
Tyr
>WENV182861188
OKPD01000017
27524
Bacteroidota
GGA
Ser
>WENV182861189
OKPD01000018
176192
Bacteroidota
TCT
Arg
>WENV182861190
OKPD01000020
69204
Bacteroidota
TGA
Ser
>WENV182861191
OKPD01000020
69204
Bacteroidota
TGA
Ser
>WENV182861192
OKPD01000020
398836
Bacteroidota
GCA
Cys
>WENV182861205
OKPD01000032
117804
Bacteroidota
TAG
Leu
>WENV182861211
OKPD01000042
398872
Bacteroidota
GGT
Thr
>WENV182861213
OKPD01000043
280532
Bacteroidota
>WENV182861227
OKPD01000056
398860
Bacteroidota
CTC
Glu
>WENV182861233
OKPD01000062
280557
Bacteroidota
CAT
Met
>WENV182861234
OKPD01000069
480318
Bacteroidota
CTG
Gln
>WENV182861237
OKPD01000075
73057
Bacteroidota
GAG
Leu
>WENV182861244
OKPD01000089
480404
Bacteroidota
TTG
Gln
>WENV182861246
OKPD01000099
175936
Bacteroidota
CAT
Met
>WENV182861248
OKPD01000112
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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