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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182861410
OKPF01000001
181746
Bacteroidota
GGC
Ala
>WENV182861420
OKPF01000005
139062
Bacteroidota
TGG
Pro
>WENV182861423
OKPF01000005
144933
Bacteroidota
TCT
Arg
>WENV182861424
OKPF01000006
411550
Bacteroidota
CTG
Gln
>WENV182861429
OKPF01000010
338165
Bacteroidota
GGT
Thr
>WENV182861433
OKPF01000013
338486
Bacteroidota
CAT
Met
>WENV182861439
OKPF01000023
139743
Bacteroidota
GGG
Pro
>WENV182861440
OKPF01000024
19317
Bacteroidota
GGA
Ser
>WENV182861444
OKPF01000025
301449
Bacteroidota
CGG
Pro
>WENV182861450
OKPF01000044
272983
Bacteroidota
CGT
Thr
>WENV182861452
OKPF01000049
58714
Bacteroidota
CAA
Leu
>WENV182861453
OKPF01000051
141414
Bacteroidota
GGG
Pro
>WENV182861455
OKPF01000055
144659
Bacteroidota
GTG
His
>WENV182861456
OKPF01000055
80614
Bacteroidota
>WENV182861461
OKPF01000058
239647
Bacteroidota
TTT
Lys
>WENV182861467
OKPF01000079
56823
Bacteroidota
TGA
Ser
>WENV182861468
OKPF01000079
338132
Bacteroidota
GCA
Cys
>WENV182861472
OKPF01000090
338164
Bacteroidota
TTC
Glu
>WENV182861474
OKPF01000090
343138
Bacteroidota
CCT
Arg
>WENV182861478
OKPF01000098
425638
Bacteroidota
CTG
Gln
>WENV182861480
OKPF01000100
126641
Bacteroidota
TAC
Val
>WENV182861485
OKPF01000121
235207
Bacteroidota
CAT
Met
>WENV182861495
OKPF01000144
144688
Bacteroidota
CAT
Met
>WENV182861499
OKPF01000166
338155
Bacteroidota
CTC
Glu
>WENV182861500
OKPF01000171
338314
Bacteroidota
CCT
Arg
>WENV182861504
OKPF01000196
338125
Bacteroidota
CCT
Arg
>WENV182861511
OKPF01000219
95618
Bacteroidota
TAG
Leu
>WENV182861514
OKPF01000228
411629
Bacteroidota
TTG
Gln
>WENV182861517
OKPF01000238
144933
Bacteroidota
TCT
Arg
>WENV182861521
OKPF01000250
147439
Bacteroidota
TCT
Arg
>WENV182861529
OKPF01000277
23696
Bacteroidota
GCT
Ser
>WENV182861532
OKPF01000282
235182
Bacteroidota
>WENV182861533
OKPF01000288
58715
Bacteroidota
GAG
Leu
>WENV182861534
OKPF01000291
235129
Bacteroidota
GCC
Gly
>WENV182861535
OKPF01000293
338132
Bacteroidota
GCA
Cys
>WENV182861536
OKPF01000296
338132
Bacteroidota
GCA
Cys
>WENV182861538
OKPF01000303
59689
Bacteroidota
CAG
Leu
>WENV182861539
OKPF01000308
411543
Bacteroidota
CTG
Gln
>WENV182861542
OKPF01000314
238121
Bacteroidota
CTT
Lys
>WENV182861543
OKPF01000314
45423
Bacteroidota
TGA
Ser
>WENV182861544
OKPF01000314
50727
Bacteroidota
TGA
Ser
>WENV182861545
OKPF01000318
338486
Bacteroidota
CAT
Met
>WENV182861546
OKPF01000319
80607
Bacteroidota
GTA
Tyr
>WENV182861547
OKPF01000320
411629
Bacteroidota
TTG
Gln
>WENV182861592
OKPF01000615
20893
Bacteroidota
GGA
Ser
>WENV182861595
OKPF01000648
144657
Bacteroidota
CGG
Pro
>WENV182861604
OKPF01000757
339341
Bacteroidota
GGT
Thr
>WENV182861619
OKPF01000852
95875
Bacteroidota
TAG
Leu
>WENV182861635
OKPF01001148
80607
Bacteroidota
GTA
Tyr
>WENV182861668
OKPF01002036
240012
Bacteroidota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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