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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182882334
OKSB01000300
175903
Bacteroidota
GTG
His
>WENV182882437
OKSB01000468
175838
Bacteroidota
GTT
Asn
>WENV182882644
OKSB01000949
57645
Bacteroidota
TGA
Ser
>WENV182882652
OKSB01000991
175902
Bacteroidota
GGC
Ala
>WENV182882696
OKSB01001110
398828
Bacteroidota
CCG
Arg
>WENV182882811
OKSB01001602
56072
Bacteroidota
TAA
Leu
>WENV182882812
OKSB01001603
74084
Bacteroidota
CAG
Leu
>WENV182882847
OKSB01001833
20449
Bacteroidota
GGA
Ser
>WENV182882871
OKSB01001998
170323
Bacteroidota
GGG
Pro
>WENV182882875
OKSB01002031
73011
Bacteroidota
CAA
Leu
>WENV182882906
OKSB01002253
57807
Bacteroidota
TGA
Ser
>WENV182882928
OKSB01002376
280553
Bacteroidota
TTT
Lys
>WENV182882951
OKSB01002551
351598
Bacteroidota
CGG
Pro
>WENV182882985
OKSB01002834
398836
Bacteroidota
GCA
Cys
>WENV182882990
OKSB01002868
20206
Bacteroidota
GGA
Ser
>WENV182882999
OKSB01002930
480325
Bacteroidota
CTG
Gln
>WENV182883018
OKSB01003083
488746
Bacteroidota
CTG
Gln
>WENV182883103
OKSB01003889
399200
Bacteroidota
CAT
Met
>WENV182883114
OKSB01004024
56493
Bacteroidota
TGA
Ser
>WENV182883155
OKSB01004480
280478
Bacteroidota
GCC
Gly
>WENV182883185
OKSB01005065
178907
Bacteroidota
TCT
Arg
>WENV182883221
OKSB01005500
484496
Bacteroidota
TTG
Gln
>WENV182883262
OKSB01006070
285750
Bacteroidota
CCC
Gly
>WENV182883349
OKSB01007551
484496
Bacteroidota
TTG
Gln
>WENV182883376
OKSB01008295
398836
Bacteroidota
GCA
Cys
>WENV182883402
OKSB01009169
175906
Bacteroidota
GTG
His
>WENV182883442
OKSB01010253
280451
Bacteroidota
CGT
Thr
>WENV182883444
OKSB01010287
404226
Bacteroidota
CCT
Arg
>WENV182883443
OKSB01010287
398871
Bacteroidota
TTC
Glu
>WENV182883452
OKSB01010407
175844
Bacteroidota
GGC
Ala
>WENV182883455
OKSB01010492
295385
Bacteroidota
CCA
Trp
>WENV182883475
OKSB01011450
176192
Bacteroidota
TCT
Arg
>WENV182883498
OKSB01012383
183889
Bacteroidota
GGC
Ala
>WENV182883515
OKSB01013310
175904
Bacteroidota
CGG
Pro
>WENV182883516
OKSB01013310
280530
Bacteroidota
CCA
Trp
>WENV182883522
OKSB01013723
285360
Bacteroidota
TTT
Lys
>WENV182883537
OKSB01014738
187400
Bacteroidota
GTT
Asn
>WENV182883541
OKSB01015056
182267
Bacteroidota
GTT
Asn
>WENV182883618
OKSB01019336
280557
Bacteroidota
CAT
Met
>WENV182883652
OKSB01021915
280446
Bacteroidota
TTT
Lys
>WENV182883682
OKSB01024696
280515
Bacteroidota
CCA
Trp
>WENV182883683
OKSB01024766
398836
Bacteroidota
GCA
Cys
>WENV182883735
OKSB01030283
289031
Bacteroidota
CAT
Met
>WENV182883787
OKSB01036305
20766
Bacteroidota
GGA
Ser
>WENV182883801
OKSB01038956
159415
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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