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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182916819
OKTU01000002
398829
Bacteroidota
CCT
Arg
>WENV182916821
OKTU01000002
56072
Bacteroidota
TAA
Leu
>WENV182916822
OKTU01000004
398828
Bacteroidota
CCG
Arg
>WENV182916823
OKTU01000005
201819
Bacteroidota
CAT
Met
>WENV182916824
OKTU01000005
201819
Bacteroidota
CAT
Met
>WENV182916858
OKTU01000035
280446
Bacteroidota
TTT
Lys
>WENV182916861
OKTU01000058
280446
Bacteroidota
TTT
Lys
>WENV182916863
OKTU01000063
117741
Bacteroidota
TAG
Leu
>WENV182916864
OKTU01000064
295385
Bacteroidota
CCA
Trp
>WENV182916865
OKTU01000066
484496
Bacteroidota
TTG
Gln
>WENV182916866
OKTU01000072
280557
Bacteroidota
CAT
Met
>WENV182916888
OKTU01000102
99847
Bacteroidota
GTA
Tyr
>WENV182916900
OKTU01000142
398836
Bacteroidota
GCA
Cys
>WENV182916901
OKTU01000143
175903
Bacteroidota
GTG
His
>WENV182916907
OKTU01000170
175902
Bacteroidota
GGC
Ala
>WENV182916921
OKTU01000214
99847
Bacteroidota
GTA
Tyr
>WENV182916922
OKTU01000215
280451
Bacteroidota
CGT
Thr
>WENV182916930
OKTU01000255
488746
Bacteroidota
CTG
Gln
>WENV182916933
OKTU01000261
398836
Bacteroidota
GCA
Cys
>WENV182916936
OKTU01000264
398829
Bacteroidota
CCT
Arg
>WENV182916947
OKTU01000279
332896
Bacteroidota
TTT
Lys
>WENV182916964
OKTU01000379
480404
Bacteroidota
TTG
Gln
>WENV182916968
OKTU01000393
57807
Bacteroidota
TGA
Ser
>WENV182916985
OKTU01000452
351598
Bacteroidota
CGG
Pro
>WENV182916996
OKTU01000529
203954
Bacteroidota
GTC
Asp
>WENV182917017
OKTU01000648
404226
Bacteroidota
CCT
Arg
>WENV182917020
OKTU01000664
175844
Bacteroidota
GGC
Ala
>WENV182917022
OKTU01000694
57807
Bacteroidota
TGA
Ser
>WENV182917051
OKTU01000848
57807
Bacteroidota
TGA
Ser
>WENV182917062
OKTU01000945
280478
Bacteroidota
GCC
Gly
>WENV182917066
OKTU01000955
20206
Bacteroidota
GGA
Ser
>WENV182917095
OKTU01001386
175906
Bacteroidota
GTG
His
>WENV182917133
OKTU01002008
178907
Bacteroidota
TCT
Arg
>WENV182917139
OKTU01002174
159415
Bacteroidota
TAC
Val
>WENV182917149
OKTU01002357
73011
Bacteroidota
CAA
Leu
>WENV182917158
OKTU01002526
480318
Bacteroidota
CTG
Gln
>WENV182917171
OKTU01002792
56493
Bacteroidota
TGA
Ser
>WENV182917180
OKTU01002946
21127
Bacteroidota
GGA
Ser
>WENV182917189
OKTU01003212
332896
Bacteroidota
TTT
Lys
>WENV182917190
OKTU01003247
57807
Bacteroidota
TGA
Ser
>WENV182917206
OKTU01003789
484496
Bacteroidota
TTG
Gln
>WENV182917210
OKTU01003832
398836
Bacteroidota
GCA
Cys
>WENV182917223
OKTU01004166
118089
Bacteroidota
TAG
Leu
>WENV182917225
OKTU01004174
99847
Bacteroidota
GTA
Tyr
>WENV182917227
OKTU01004196
175904
Bacteroidota
CGG
Pro
>WENV182917228
OKTU01004196
280530
Bacteroidota
CCA
Trp
>WENV182917231
OKTU01004326
285750
Bacteroidota
CCC
Gly
>WENV182917371
OKTU01008744
480325
Bacteroidota
CTG
Gln
>WENV182917409
OKTU01010865
117804
Bacteroidota
TAG
Leu
>WENV182917416
OKTU01011067
398871
Bacteroidota
TTC
Glu
>WENV182917427
OKTU01011660
186874
Bacteroidota
CAT
Met
>WENV182917442
OKTU01012659
399200
Bacteroidota
CAT
Met
>WENV182917495
OKTU01019623
74084
Bacteroidota
CAG
Leu
>WENV182917504
OKTU01021212
405877
Bacteroidota
GGT
Thr
>WENV182917529
OKTU01025609
20449
Bacteroidota
GGA
Ser
>WENV182917530
OKTU01025673
483416
Bacteroidota
CTG
Gln
>WENV182917579
OKTU01034090
399026
Bacteroidota
CCT
Arg
>WENV182917601
OKTU01038973
20766
Bacteroidota
GGA
Ser
>WENV182917639
OKTU01052627
186108
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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