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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182942638
OKVH01002392
267954
Bacteroidota
GCC
Gly
>WENV182943055
OKVH01019701
338486
Bacteroidota
CAT
Met
>WENV182942678
OKVH01003037
415410
Bacteroidota
TTG
Gln
>WENV182942967
OKVH01012933
155123
Bacteroidota
GTT
Asn
>WENV182942846
OKVH01007180
341950
Bacteroidota
>WENV182943253
OKVH01052011
238121
Bacteroidota
CTT
Lys
>WENV182943131
OKVH01028912
338132
Bacteroidota
GCA
Cys
>WENV182942939
OKVH01010839
235207
Bacteroidota
CAT
Met
>WENV182942165
OKVH01000023
154643
Bacteroidota
CAT
Met
>WENV182942741
OKVH01004311
144590
Bacteroidota
GTT
Asn
>WENV182942555
OKVH01001587
419272
Bacteroidota
CTG
Gln
>WENV182943155
OKVH01033752
95875
Bacteroidota
TAG
Leu
>WENV182942549
OKVH01001508
240012
Bacteroidota
CCC
Gly
>WENV182943163
OKVH01034656
50727
Bacteroidota
TGA
Ser
>WENV182943054
OKVH01019634
50727
Bacteroidota
TGA
Ser
>WENV182942981
OKVH01014375
132360
Bacteroidota
GGG
Pro
>WENV182943255
OKVH01052215
353927
Bacteroidota
TTC
Glu
>WENV182942306
OKVH01000322
353927
Bacteroidota
TTC
Glu
>WENV182942528
OKVH01001320
414426
Bacteroidota
CTG
Gln
>WENV182942588
OKVH01001883
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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