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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182993053
OLAX01001564
280451
Bacteroidota
CGT
Thr
>WENV182993123
OLAX01004960
351598
Bacteroidota
CGG
Pro
>WENV182993160
OLAX01008099
56072
Bacteroidota
TAA
Leu
>WENV182993164
OLAX01008476
398828
Bacteroidota
CCG
Arg
>WENV182993167
OLAX01009123
365112
Bacteroidota
TTT
Lys
>WENV182993168
OLAX01009202
484496
Bacteroidota
TTG
Gln
>WENV182993182
OLAX01012009
175903
Bacteroidota
GTG
His
>WENV182993186
OLAX01012710
186874
Bacteroidota
CAT
Met
>WENV182993218
OLAX01020060
20206
Bacteroidota
GGA
Ser
>WENV182993221
OLAX01021136
280557
Bacteroidota
CAT
Met
>WENV182993227
OLAX01022022
483416
Bacteroidota
CTG
Gln
>WENV182993232
OLAX01022698
175838
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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