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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183007043
OLDG01001124
172207
Bacteroidota
GGG
Pro
>WENV183007014
OLDG01000869
117741
Bacteroidota
TAG
Leu
>WENV183006931
OLDG01000117
175838
Bacteroidota
GTT
Asn
>WENV183006891
OLDG01000033
400161
Bacteroidota
GGT
Thr
>WENV183007050
OLDG01001294
289031
Bacteroidota
CAT
Met
>WENV183006955
OLDG01000336
280557
Bacteroidota
CAT
Met
>WENV183007148
OLDG01005382
20206
Bacteroidota
GGA
Ser
>WENV183007054
OLDG01001422
483416
Bacteroidota
CTG
Gln
>WENV183007100
OLDG01002413
118221
Bacteroidota
CAA
Leu
>WENV183006958
OLDG01000371
56493
Bacteroidota
TGA
Ser
>WENV183007051
OLDG01001310
175903
Bacteroidota
GTG
His
>WENV183006906
OLDG01000054
178571
Bacteroidota
GTT
Asn
>WENV183007284
OLDG01027811
242241
Bacteroidota
GTC
Asp
>WENV183007123
OLDG01003652
56072
Bacteroidota
TAA
Leu
>WENV183007105
OLDG01002815
175902
Bacteroidota
GGC
Ala
>WENV183007159
OLDG01005955
280451
Bacteroidota
CGT
Thr
>WENV183007262
OLDG01022901
418894
Bacteroidota
TTC
Glu
>WENV183007110
OLDG01003044
99847
Bacteroidota
GTA
Tyr
>WENV183007155
OLDG01005757
404109
Bacteroidota
CTC
Glu
>WENV183006966
OLDG01000405
186874
Bacteroidota
CAT
Met
>WENV183006951
OLDG01000267
488746
Bacteroidota
CTG
Gln
>WENV183007243
OLDG01014921
175844
Bacteroidota
GGC
Ala
>WENV183007278
OLDG01025842
183889
Bacteroidota
GGC
Ala
>WENV183007093
OLDG01002259
398828
Bacteroidota
CCG
Arg
>WENV183007188
OLDG01008042
481328
Bacteroidota
TTG
Gln
>WENV183007016
OLDG01000895
69204
Bacteroidota
TGA
Ser
>WENV183006987
OLDG01000592
280446
Bacteroidota
TTT
Lys
>WENV183007049
OLDG01001273
484496
Bacteroidota
TTG
Gln
>WENV183006885
OLDG01000025
188555
Bacteroidota
CAT
Met
>WENV183006948
OLDG01000255
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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