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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183011253
OLDZ01000329
412235
Bacteroidota
>WENV183011379
OLDZ01003379
80614
Bacteroidota
>WENV183011589
OLDZ01020175
59689
Bacteroidota
CAG
Leu
>WENV183011586
OLDZ01019386
338486
Bacteroidota
CAT
Met
>WENV183011394
OLDZ01003830
144657
Bacteroidota
CGG
Pro
>WENV183011280
OLDZ01000704
237796
Bacteroidota
CGT
Thr
>WENV183011315
OLDZ01001056
338155
Bacteroidota
CTC
Glu
>WENV183011195
OLDZ01000009
344769
Bacteroidota
CTC
Glu
>WENV183011322
OLDZ01001277
413663
Bacteroidota
CTG
Gln
>WENV183011251
OLDZ01000323
411543
Bacteroidota
CTG
Gln
>WENV183011405
OLDZ01004030
425638
Bacteroidota
CTG
Gln
>WENV183011594
OLDZ01021611
238121
Bacteroidota
CTT
Lys
>WENV183011289
OLDZ01000775
59498
Bacteroidota
GAG
Leu
>WENV183011316
OLDZ01001094
338132
Bacteroidota
GCA
Cys
>WENV183011412
OLDZ01004406
235129
Bacteroidota
GCC
Gly
>WENV183011314
OLDZ01001056
23696
Bacteroidota
GCT
Ser
>WENV183011255
OLDZ01000339
16224
Bacteroidota
GGA
Ser
>WENV183011268
OLDZ01000499
144596
Bacteroidota
GGC
Ala
>WENV183011214
OLDZ01000056
127023
Bacteroidota
GGG
Pro
>WENV183011294
OLDZ01000799
339412
Bacteroidota
GGT
Thr
>WENV183011293
OLDZ01000799
95986
Bacteroidota
GTA
Tyr
>WENV183011600
OLDZ01022636
185921
Bacteroidota
GTC
Asp
>WENV183011196
OLDZ01000009
146764
Bacteroidota
GTC
Asp
>WENV183011297
OLDZ01000839
147147
Bacteroidota
GTG
His
>WENV183011212
OLDZ01000042
155123
Bacteroidota
GTT
Asn
>WENV183011548
OLDZ01012886
44852
Bacteroidota
TAA
Leu
>WENV183011254
OLDZ01000333
136244
Bacteroidota
TAC
Val
>WENV183011432
OLDZ01005387
126641
Bacteroidota
TAC
Val
>WENV183011559
OLDZ01015745
95875
Bacteroidota
TAG
Leu
>WENV183011619
OLDZ01028937
147439
Bacteroidota
TCT
Arg
>WENV183011307
OLDZ01001031
52358
Bacteroidota
TGA
Ser
>WENV183011613
OLDZ01026907
338164
Bacteroidota
TTC
Glu
>WENV183011248
OLDZ01000230
415410
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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