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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183015749
OLEQ01000017
176192
Bacteroidota
TCT
Arg
>WENV183015757
OLEQ01000043
398829
Bacteroidota
CCT
Arg
>WENV183015758
OLEQ01000045
480404
Bacteroidota
TTG
Gln
>WENV183015759
OLEQ01000046
69204
Bacteroidota
TGA
Ser
>WENV183015771
OLEQ01000337
351598
Bacteroidota
CGG
Pro
>WENV183015779
OLEQ01000428
20492
Bacteroidota
GGA
Ser
>WENV183015780
OLEQ01000438
351598
Bacteroidota
CGG
Pro
>WENV183015784
OLEQ01000451
280530
Bacteroidota
CCA
Trp
>WENV183015785
OLEQ01000499
280553
Bacteroidota
TTT
Lys
>WENV183015789
OLEQ01000571
159415
Bacteroidota
TAC
Val
>WENV183015799
OLEQ01001190
285360
Bacteroidota
TTT
Lys
>WENV183015801
OLEQ01001264
118089
Bacteroidota
TAG
Leu
>WENV183015816
OLEQ01001637
404226
Bacteroidota
CCT
Arg
>WENV183015831
OLEQ01002404
398836
Bacteroidota
GCA
Cys
>WENV183015833
OLEQ01002476
175906
Bacteroidota
GTG
His
>WENV183015837
OLEQ01002858
170323
Bacteroidota
GGG
Pro
>WENV183015846
OLEQ01003482
398836
Bacteroidota
GCA
Cys
>WENV183015854
OLEQ01003868
175908
Bacteroidota
GTC
Asp
>WENV183015868
OLEQ01004865
73011
Bacteroidota
CAA
Leu
>WENV183015895
OLEQ01006093
399200
Bacteroidota
CAT
Met
>WENV183015908
OLEQ01007668
175904
Bacteroidota
CGG
Pro
>WENV183015917
OLEQ01009380
280478
Bacteroidota
GCC
Gly
>WENV183015918
OLEQ01009416
74084
Bacteroidota
CAG
Leu
>WENV183015930
OLEQ01011466
20449
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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