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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183018430
OLEZ01000001
56823
Bacteroidota
TGA
Ser
>WENV183018431
OLEZ01000001
144656
Bacteroidota
GTG
His
>WENV183018432
OLEZ01000002
436206
Bacteroidota
TTG
Gln
>WENV183018433
OLEZ01000003
235097
Bacteroidota
TTT
Lys
>WENV183018437
OLEZ01000005
144655
Bacteroidota
GGC
Ala
>WENV183018439
OLEZ01000008
301449
Bacteroidota
CGG
Pro
>WENV183018442
OLEZ01000011
16220
Bacteroidota
GGA
Ser
>WENV183018443
OLEZ01000013
144590
Bacteroidota
GTT
Asn
>WENV183018447
OLEZ01000016
141414
Bacteroidota
GGG
Pro
>WENV183018450
OLEZ01000019
16224
Bacteroidota
GGA
Ser
>WENV183018452
OLEZ01000022
338125
Bacteroidota
CCT
Arg
>WENV183018454
OLEZ01000032
235207
Bacteroidota
CAT
Met
>WENV183018455
OLEZ01000034
338124
Bacteroidota
CCG
Arg
>WENV183018456
OLEZ01000035
95559
Bacteroidota
TAG
Leu
>WENV183018465
OLEZ01000077
56823
Bacteroidota
TGA
Ser
>WENV183018470
OLEZ01000151
235102
Bacteroidota
CGT
Thr
>WENV183018485
OLEZ01000367
425638
Bacteroidota
CTG
Gln
>WENV183018487
OLEZ01000427
338132
Bacteroidota
GCA
Cys
>WENV183018558
OLEZ01004912
144933
Bacteroidota
TCT
Arg
>WENV183018575
OLEZ01007139
144596
Bacteroidota
GGC
Ala
>WENV183018585
OLEZ01010381
23696
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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