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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183019628
OLFD01000001
141414
Bacteroidota
GGG
Pro
>WENV183019629
OLFD01000001
235097
Bacteroidota
TTT
Lys
>WENV183019631
OLFD01000001
16220
Bacteroidota
GGA
Ser
>WENV183019633
OLFD01000002
338132
Bacteroidota
GCA
Cys
>WENV183019639
OLFD01000005
301449
Bacteroidota
CGG
Pro
>WENV183019641
OLFD01000006
338125
Bacteroidota
CCT
Arg
>WENV183019642
OLFD01000008
436206
Bacteroidota
TTG
Gln
>WENV183019643
OLFD01000009
193809
Bacteroidota
CAT
Met
>WENV183019648
OLFD01000014
239647
Bacteroidota
TTT
Lys
>WENV183019651
OLFD01000015
56823
Bacteroidota
TGA
Ser
>WENV183019652
OLFD01000015
144656
Bacteroidota
GTG
His
>WENV183019653
OLFD01000015
16224
Bacteroidota
GGA
Ser
>WENV183019659
OLFD01000039
338124
Bacteroidota
CCG
Arg
>WENV183019660
OLFD01000043
235207
Bacteroidota
CAT
Met
>WENV183019672
OLFD01000096
144596
Bacteroidota
GGC
Ala
>WENV183019673
OLFD01000104
235102
Bacteroidota
CGT
Thr
>WENV183019674
OLFD01000105
144655
Bacteroidota
GGC
Ala
>WENV183019681
OLFD01000155
19317
Bacteroidota
GGA
Ser
>WENV183019687
OLFD01000183
338132
Bacteroidota
GCA
Cys
>WENV183019689
OLFD01000191
235207
Bacteroidota
CAT
Met
>WENV183019692
OLFD01000211
56823
Bacteroidota
TGA
Ser
>WENV183019693
OLFD01000229
56823
Bacteroidota
TGA
Ser
>WENV183019695
OLFD01000249
141414
Bacteroidota
GGG
Pro
>WENV183019700
OLFD01000255
95559
Bacteroidota
TAG
Leu
>WENV183019702
OLFD01000276
338314
Bacteroidota
CCT
Arg
>WENV183019703
OLFD01000284
235097
Bacteroidota
TTT
Lys
>WENV183019705
OLFD01000300
411543
Bacteroidota
CTG
Gln
>WENV183019706
OLFD01000324
141414
Bacteroidota
GGG
Pro
>WENV183019707
OLFD01000328
338132
Bacteroidota
GCA
Cys
>WENV183019708
OLFD01000344
411629
Bacteroidota
TTG
Gln
>WENV183019711
OLFD01000375
185921
Bacteroidota
GTC
Asp
>WENV183019714
OLFD01000392
95618
Bacteroidota
TAG
Leu
>WENV183019719
OLFD01000498
126641
Bacteroidota
TAC
Val
>WENV183019723
OLFD01000613
425638
Bacteroidota
CTG
Gln
>WENV183019726
OLFD01000677
436206
Bacteroidota
TTG
Gln
>WENV183019728
OLFD01000706
272983
Bacteroidota
CGT
Thr
>WENV183019732
OLFD01000780
144688
Bacteroidota
CAT
Met
>WENV183019737
OLFD01000953
139062
Bacteroidota
TGG
Pro
>WENV183019752
OLFD01001326
344692
Bacteroidota
GGT
Thr
>WENV183019763
OLFD01001577
141414
Bacteroidota
GGG
Pro
>WENV183019772
OLFD01001750
235182
Bacteroidota
>WENV183019801
OLFD01002826
414426
Bacteroidota
CTG
Gln
>WENV183019823
OLFD01004555
243025
Bacteroidota
CAT
Met
>WENV183019827
OLFD01004923
153993
Bacteroidota
GAT
Ile
>WENV183019836
OLFD01005864
267954
Bacteroidota
GCC
Gly
>WENV183019840
OLFD01006204
353927
Bacteroidota
TTC
Glu
>WENV183019859
OLFD01007057
151121
Bacteroidota
CAT
Met
>WENV183019871
OLFD01010064
154643
Bacteroidota
CAT
Met
>WENV183019883
OLFD01012332
17323
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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