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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
129 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183027668
OLFV01000239
412235
Bacteroidota
>WENV183028830
OLFV01009540
80614
Bacteroidota
>WENV183028282
OLFV01001586
95987
Bacteroidota
CAA
Leu
>WENV183028605
OLFV01003807
95987
Bacteroidota
CAA
Leu
>WENV183028700
OLFV01005466
95987
Bacteroidota
CAA
Leu
>WENV183027542
OLFV01000101
58714
Bacteroidota
CAA
Leu
>WENV183027473
OLFV01000052
59689
Bacteroidota
CAG
Leu
>WENV183029027
OLFV01027812
243025
Bacteroidota
CAT
Met
>WENV183028214
OLFV01001340
338486
Bacteroidota
CAT
Met
>WENV183027367
OLFV01000014
338486
Bacteroidota
CAT
Met
>WENV183027960
OLFV01000654
144695
Bacteroidota
CAT
Met
>WENV183028267
OLFV01001513
193809
Bacteroidota
CAT
Met
>WENV183028264
OLFV01001504
193809
Bacteroidota
CAT
Met
>WENV183028129
OLFV01001080
193809
Bacteroidota
CAT
Met
>WENV183027566
OLFV01000130
193809
Bacteroidota
CAT
Met
>WENV183028441
OLFV01002371
235207
Bacteroidota
CAT
Met
>WENV183028559
OLFV01003352
147148
Bacteroidota
CAT
Met
>WENV183028786
OLFV01008089
154643
Bacteroidota
CAT
Met
>WENV183028993
OLFV01023767
237797
Bacteroidota
CCA
Trp
>WENV183027670
OLFV01000242
240012
Bacteroidota
CCC
Gly
>WENV183028119
OLFV01001060
412236
Bacteroidota
CCC
Gly
>WENV183027745
OLFV01000351
338124
Bacteroidota
CCG
Arg
>WENV183027438
OLFV01000033
343138
Bacteroidota
CCT
Arg
>WENV183027862
OLFV01000445
338125
Bacteroidota
CCT
Arg
>WENV183028271
OLFV01001529
144657
Bacteroidota
CGG
Pro
>WENV183028213
OLFV01001334
238810
Bacteroidota
CGG
Pro
>WENV183028060
OLFV01000919
235102
Bacteroidota
CGT
Thr
>WENV183027477
OLFV01000054
237796
Bacteroidota
CGT
Thr
>WENV183027864
OLFV01000449
237796
Bacteroidota
CGT
Thr
>WENV183027974
OLFV01000693
237796
Bacteroidota
CGT
Thr
>WENV183028228
OLFV01001399
237796
Bacteroidota
CGT
Thr
>WENV183027958
OLFV01000651
302002
Bacteroidota
CGT
Thr
>WENV183028427
OLFV01002304
394247
Bacteroidota
CTC
Glu
>WENV183028426
OLFV01002304
394247
Bacteroidota
CTC
Glu
>WENV183027902
OLFV01000534
394247
Bacteroidota
CTC
Glu
>WENV183027901
OLFV01000534
394247
Bacteroidota
CTC
Glu
>WENV183027932
OLFV01000580
344769
Bacteroidota
CTC
Glu
>WENV183027931
OLFV01000580
344769
Bacteroidota
CTC
Glu
>WENV183029114
OLFV01051725
411543
Bacteroidota
CTG
Gln
>WENV183028177
OLFV01001222
419272
Bacteroidota
CTG
Gln
>WENV183028510
OLFV01002793
411550
Bacteroidota
CTG
Gln
>WENV183028773
OLFV01007492
414426
Bacteroidota
CTG
Gln
>WENV183027406
OLFV01000027
238121
Bacteroidota
CTT
Lys
>WENV183027385
OLFV01000021
263771
Bacteroidota
CTT
Lys
>WENV183028521
OLFV01002912
313363
Bacteroidota
GAA
Phe
>WENV183028183
OLFV01001237
313363
Bacteroidota
GAA
Phe
>WENV183028019
OLFV01000834
313363
Bacteroidota
GAA
Phe
>WENV183028015
OLFV01000821
313363
Bacteroidota
GAA
Phe
>WENV183027588
OLFV01000148
313363
Bacteroidota
GAA
Phe
>WENV183027474
OLFV01000052
58715
Bacteroidota
GAG
Leu
>WENV183028311
OLFV01001705
59498
Bacteroidota
GAG
Leu
>WENV183028081
OLFV01000971
59498
Bacteroidota
GAG
Leu
>WENV183027784
OLFV01000419
338132
Bacteroidota
GCA
Cys
>WENV183027491
OLFV01000068
267954
Bacteroidota
GCC
Gly
>WENV183027492
OLFV01000068
267954
Bacteroidota
GCC
Gly
>WENV183028371
OLFV01001974
267954
Bacteroidota
GCC
Gly
>WENV183027755
OLFV01000367
235129
Bacteroidota
GCC
Gly
>WENV183027783
OLFV01000419
23696
Bacteroidota
GCT
Ser
>WENV183028954
OLFV01018094
17323
Bacteroidota
GGA
Ser
>WENV183027989
OLFV01000741
20893
Bacteroidota
GGA
Ser
>WENV183027398
OLFV01000024
16224
Bacteroidota
GGA
Ser
>WENV183027584
OLFV01000141
16220
Bacteroidota
GGA
Ser
>WENV183027870
OLFV01000472
144655
Bacteroidota
GGC
Ala
>WENV183029008
OLFV01024384
151960
Bacteroidota
GGC
Ala
>WENV183028518
OLFV01002888
141414
Bacteroidota
GGG
Pro
>WENV183028474
OLFV01002517
141414
Bacteroidota
GGG
Pro
>WENV183027577
OLFV01000138
139743
Bacteroidota
GGG
Pro
>WENV183027511
OLFV01000074
127023
Bacteroidota
GGG
Pro
>WENV183028483
OLFV01002588
339412
Bacteroidota
GGT
Thr
>WENV183028871
OLFV01011106
339341
Bacteroidota
GGT
Thr
>WENV183028977
OLFV01021410
344692
Bacteroidota
GGT
Thr
>WENV183028029
OLFV01000856
80607
Bacteroidota
GTA
Tyr
>WENV183028654
OLFV01004430
196394
Bacteroidota
GTC
Asp
>WENV183028653
OLFV01004430
196394
Bacteroidota
GTC
Asp
>WENV183028684
OLFV01005026
185921
Bacteroidota
GTC
Asp
>WENV183028308
OLFV01001679
146764
Bacteroidota
GTC
Asp
>WENV183028307
OLFV01001679
146764
Bacteroidota
GTC
Asp
>WENV183028191
OLFV01001248
147147
Bacteroidota
GTG
His
>WENV183028190
OLFV01001248
147147
Bacteroidota
GTG
His
>WENV183027934
OLFV01000580
147147
Bacteroidota
GTG
His
>WENV183027933
OLFV01000580
147147
Bacteroidota
GTG
His
>WENV183027397
OLFV01000024
144656
Bacteroidota
GTG
His
>WENV183027671
OLFV01000244
144659
Bacteroidota
GTG
His
>WENV183028709
OLFV01005714
155123
Bacteroidota
GTT
Asn
>WENV183027939
OLFV01000600
155123
Bacteroidota
GTT
Asn
>WENV183027715
OLFV01000301
144590
Bacteroidota
GTT
Asn
>WENV183028471
OLFV01002490
37076
Bacteroidota
TAA
Leu
>WENV183028257
OLFV01001473
37076
Bacteroidota
TAA
Leu
>WENV183028010
OLFV01000795
37076
Bacteroidota
TAA
Leu
>WENV183027593
OLFV01000154
37076
Bacteroidota
TAA
Leu
>WENV183027609
OLFV01000173
141635
Bacteroidota
TAC
Val
>WENV183027610
OLFV01000173
141635
Bacteroidota
TAC
Val
>WENV183027639
OLFV01000197
141635
Bacteroidota
TAC
Val
>WENV183027686
OLFV01000269
141635
Bacteroidota
TAC
Val
>WENV183027863
OLFV01000447
141635
Bacteroidota
TAC
Val
>WENV183027914
OLFV01000541
141635
Bacteroidota
TAC
Val
>WENV183027947
OLFV01000616
141635
Bacteroidota
TAC
Val
>WENV183027987
OLFV01000736
141635
Bacteroidota
TAC
Val
>WENV183028202
OLFV01001272
141635
Bacteroidota
TAC
Val
>WENV183029014
OLFV01025434
126641
Bacteroidota
TAC
Val
>WENV183027590
OLFV01000151
136207
Bacteroidota
TAC
Val
>WENV183027489
OLFV01000062
136207
Bacteroidota
TAC
Val
>WENV183027488
OLFV01000062
136207
Bacteroidota
TAC
Val
>WENV183027889
OLFV01000530
95559
Bacteroidota
TAG
Leu
>WENV183027541
OLFV01000101
95875
Bacteroidota
TAG
Leu
>WENV183029045
OLFV01031109
144933
Bacteroidota
TCT
Arg
>WENV183027706
OLFV01000288
147439
Bacteroidota
TCT
Arg
>WENV183027407
OLFV01000027
45423
Bacteroidota
TGA
Ser
>WENV183027965
OLFV01000664
53439
Bacteroidota
TGA
Ser
>WENV183027964
OLFV01000664
53439
Bacteroidota
TGA
Ser
>WENV183027408
OLFV01000027
50727
Bacteroidota
TGA
Ser
>WENV183027396
OLFV01000024
56823
Bacteroidota
TGA
Ser
>WENV183027669
OLFV01000240
128251
Bacteroidota
TGG
Pro
>WENV183027946
OLFV01000612
146762
Bacteroidota
TGG
Pro
>WENV183028222
OLFV01001382
145504
Bacteroidota
TGT
Thr
>WENV183027437
OLFV01000033
338164
Bacteroidota
TTC
Glu
>WENV183027683
OLFV01000264
353927
Bacteroidota
TTC
Glu
>WENV183027682
OLFV01000264
353927
Bacteroidota
TTC
Glu
>WENV183027482
OLFV01000056
353927
Bacteroidota
TTC
Glu
>WENV183028623
OLFV01003939
436206
Bacteroidota
TTG
Gln
>WENV183028263
OLFV01001503
412479
Bacteroidota
TTG
Gln
>WENV183028067
OLFV01000948
412479
Bacteroidota
TTG
Gln
>WENV183028486
OLFV01002631
415558
Bacteroidota
TTG
Gln
>WENV183028031
OLFV01000860
415558
Bacteroidota
TTG
Gln
>WENV183027532
OLFV01000093
415558
Bacteroidota
TTG
Gln
>WENV183028600
OLFV01003757
235203
Bacteroidota
TTT
Lys
>WENV183027484
OLFV01000057
235203
Bacteroidota
TTT
Lys
>WENV183027390
OLFV01000022
235203
Bacteroidota
TTT
Lys
>WENV183028809
OLFV01008723
280513
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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