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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183032170
OLFY01000011
158068
Bacteroidota
GGG
Pro
>WENV183032171
OLFY01000011
488746
Bacteroidota
CTG
Gln
>WENV183032172
OLFY01000011
20206
Bacteroidota
GGA
Ser
>WENV183032262
OLFY01000040
285750
Bacteroidota
CCC
Gly
>WENV183032263
OLFY01000040
178907
Bacteroidota
TCT
Arg
>WENV183032289
OLFY01000051
156128
Bacteroidota
GGG
Pro
>WENV183032323
OLFY01000070
56493
Bacteroidota
TGA
Ser
>WENV183032360
OLFY01000092
289031
Bacteroidota
CAT
Met
>WENV183032376
OLFY01000103
480325
Bacteroidota
CTG
Gln
>WENV183032430
OLFY01000140
178571
Bacteroidota
GTT
Asn
>WENV183032464
OLFY01000186
280557
Bacteroidota
CAT
Met
>WENV183032465
OLFY01000187
483416
Bacteroidota
CTG
Gln
>WENV183032475
OLFY01000200
481044
Bacteroidota
>WENV183032477
OLFY01000203
332896
Bacteroidota
TTT
Lys
>WENV183032502
OLFY01000228
280557
Bacteroidota
CAT
Met
>WENV183032529
OLFY01000263
73011
Bacteroidota
CAA
Leu
>WENV183032544
OLFY01000272
283315
Bacteroidota
CGT
Thr
>WENV183032553
OLFY01000279
117741
Bacteroidota
TAG
Leu
>WENV183032569
OLFY01000309
398836
Bacteroidota
GCA
Cys
>WENV183032575
OLFY01000315
56385
Bacteroidota
TGA
Ser
>WENV183032578
OLFY01000318
175903
Bacteroidota
GTG
His
>WENV183032589
OLFY01000338
404226
Bacteroidota
CCT
Arg
>WENV183032590
OLFY01000338
398871
Bacteroidota
TTC
Glu
>WENV183032650
OLFY01000393
280446
Bacteroidota
TTT
Lys
>WENV183032651
OLFY01000394
56493
Bacteroidota
TGA
Ser
>WENV183032652
OLFY01000394
56493
Bacteroidota
TGA
Ser
>WENV183032677
OLFY01000433
99847
Bacteroidota
GTA
Tyr
>WENV183032678
OLFY01000435
332896
Bacteroidota
TTT
Lys
>WENV183032699
OLFY01000477
74084
Bacteroidota
CAG
Leu
>WENV183032704
OLFY01000488
99847
Bacteroidota
GTA
Tyr
>WENV183032711
OLFY01000496
398829
Bacteroidota
CCT
Arg
>WENV183032721
OLFY01000509
484496
Bacteroidota
TTG
Gln
>WENV183032737
OLFY01000546
175844
Bacteroidota
GGC
Ala
>WENV183032754
OLFY01000577
29791
Bacteroidota
GCT
Ser
>WENV183032755
OLFY01000577
398860
Bacteroidota
CTC
Glu
>WENV183032759
OLFY01000583
56493
Bacteroidota
TGA
Ser
>WENV183032794
OLFY01000636
118221
Bacteroidota
CAA
Leu
>WENV183032801
OLFY01000642
398828
Bacteroidota
CCG
Arg
>WENV183032811
OLFY01000668
20449
Bacteroidota
GGA
Ser
>WENV183032859
OLFY01000785
398828
Bacteroidota
CCG
Arg
>WENV183032882
OLFY01000823
404109
Bacteroidota
CTC
Glu
>WENV183032883
OLFY01000823
404109
Bacteroidota
CTC
Glu
>WENV183032959
OLFY01001003
178134
Bacteroidota
TGG
Pro
>WENV183032992
OLFY01001137
332896
Bacteroidota
TTT
Lys
>WENV183032998
OLFY01001145
484496
Bacteroidota
TTG
Gln
>WENV183033015
OLFY01001203
405877
Bacteroidota
GGT
Thr
>WENV183033040
OLFY01001284
280446
Bacteroidota
TTT
Lys
>WENV183033059
OLFY01001351
56385
Bacteroidota
TGA
Ser
>WENV183033072
OLFY01001401
20766
Bacteroidota
GGA
Ser
>WENV183033073
OLFY01001414
484496
Bacteroidota
TTG
Gln
>WENV183033105
OLFY01001573
481328
Bacteroidota
TTG
Gln
>WENV183033130
OLFY01001678
398836
Bacteroidota
GCA
Cys
>WENV183033143
OLFY01001723
182267
Bacteroidota
GTT
Asn
>WENV183033174
OLFY01001831
186874
Bacteroidota
CAT
Met
>WENV183033180
OLFY01001856
187814
Bacteroidota
GTC
Asp
>WENV183033209
OLFY01001967
351598
Bacteroidota
CGG
Pro
>WENV183033212
OLFY01001997
176192
Bacteroidota
TCT
Arg
>WENV183033300
OLFY01002542
399200
Bacteroidota
CAT
Met
>WENV183033307
OLFY01002593
398836
Bacteroidota
GCA
Cys
>WENV183033322
OLFY01002695
332896
Bacteroidota
TTT
Lys
>WENV183033347
OLFY01002821
400161
Bacteroidota
GGT
Thr
>WENV183033390
OLFY01003067
175904
Bacteroidota
CGG
Pro
>WENV183033391
OLFY01003067
280530
Bacteroidota
CCA
Trp
>WENV183033402
OLFY01003149
182267
Bacteroidota
GTT
Asn
>WENV183033435
OLFY01003431
156467
Bacteroidota
TGG
Pro
>WENV183033447
OLFY01003518
118089
Bacteroidota
TAG
Leu
>WENV183033452
OLFY01003547
332896
Bacteroidota
TTT
Lys
>WENV183033466
OLFY01003658
175906
Bacteroidota
GTG
His
>WENV183033520
OLFY01004127
186874
Bacteroidota
CAT
Met
>WENV183033540
OLFY01004277
285360
Bacteroidota
TTT
Lys
>WENV183033609
OLFY01005298
175944
Bacteroidota
CAT
Met
>WENV183033621
OLFY01005846
187814
Bacteroidota
GTC
Asp
>WENV183033622
OLFY01005846
187814
Bacteroidota
GTC
Asp
>WENV183033636
OLFY01006038
46648
Bacteroidota
TAA
Leu
>WENV183033792
OLFY01009995
183889
Bacteroidota
GGC
Ala
>WENV183033800
OLFY01010498
280515
Bacteroidota
CCA
Trp
>WENV183033815
OLFY01011401
175886
Bacteroidota
GGC
Ala
>WENV183033827
OLFY01011972
186108
Bacteroidota
GTT
Asn
>WENV183033829
OLFY01012018
191205
Bacteroidota
TGG
Pro
>WENV183033839
OLFY01012536
57807
Bacteroidota
TGA
Ser
>WENV183033871
OLFY01014589
178133
Bacteroidota
GAT
Ile
>WENV183033918
OLFY01018102
312035
Bacteroidota
CCA
Trp
>WENV183033991
OLFY01023981
156068
Bacteroidota
TAC
Val
>WENV183034122
OLFY01047136
291612
Bacteroidota
>WENV183034171
OLFY01060505
418894
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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