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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183051351
OLGJ01000012
182267
Bacteroidota
GTT
Asn
>WENV183051357
OLGJ01000016
118221
Bacteroidota
CAA
Leu
>WENV183051389
OLGJ01000055
172085
Bacteroidota
TAC
Val
>WENV183051391
OLGJ01000057
175944
Bacteroidota
CAT
Met
>WENV183051401
OLGJ01000082
56385
Bacteroidota
TGA
Ser
>WENV183051429
OLGJ01000135
56385
Bacteroidota
TGA
Ser
>WENV183051433
OLGJ01000147
118221
Bacteroidota
CAA
Leu
>WENV183051443
OLGJ01000155
46648
Bacteroidota
TAA
Leu
>WENV183051444
OLGJ01000158
481328
Bacteroidota
TTG
Gln
>WENV183051446
OLGJ01000158
46648
Bacteroidota
TAA
Leu
>WENV183051466
OLGJ01000204
285360
Bacteroidota
TTT
Lys
>WENV183051467
OLGJ01000204
280557
Bacteroidota
CAT
Met
>WENV183051470
OLGJ01000215
172085
Bacteroidota
TAC
Val
>WENV183051515
OLGJ01000338
186874
Bacteroidota
CAT
Met
>WENV183051516
OLGJ01000339
280446
Bacteroidota
TTT
Lys
>WENV183051522
OLGJ01000353
481328
Bacteroidota
TTG
Gln
>WENV183051536
OLGJ01000393
178134
Bacteroidota
TGG
Pro
>WENV183051537
OLGJ01000397
46648
Bacteroidota
TAA
Leu
>WENV183051551
OLGJ01000430
172085
Bacteroidota
TAC
Val
>WENV183051555
OLGJ01000446
289031
Bacteroidota
CAT
Met
>WENV183051566
OLGJ01000512
398836
Bacteroidota
GCA
Cys
>WENV183051591
OLGJ01000650
175904
Bacteroidota
CGG
Pro
>WENV183051593
OLGJ01000656
404109
Bacteroidota
CTC
Glu
>WENV183051640
OLGJ01000907
398829
Bacteroidota
CCT
Arg
>WENV183051657
OLGJ01001078
480404
Bacteroidota
TTG
Gln
>WENV183051660
OLGJ01001130
99847
Bacteroidota
GTA
Tyr
>WENV183051708
OLGJ01001673
483416
Bacteroidota
CTG
Gln
>WENV183051709
OLGJ01001708
27524
Bacteroidota
GGA
Ser
>WENV183051732
OLGJ01001933
156467
Bacteroidota
TGG
Pro
>WENV183051759
OLGJ01002186
398829
Bacteroidota
CCT
Arg
>WENV183051762
OLGJ01002277
242241
Bacteroidota
GTC
Asp
>WENV183051763
OLGJ01002277
242241
Bacteroidota
GTC
Asp
>WENV183051764
OLGJ01002303
191205
Bacteroidota
TGG
Pro
>WENV183051771
OLGJ01002391
280553
Bacteroidota
TTT
Lys
>WENV183051800
OLGJ01003397
69204
Bacteroidota
TGA
Ser
>WENV183051802
OLGJ01003436
280451
Bacteroidota
CGT
Thr
>WENV183051803
OLGJ01003510
280478
Bacteroidota
GCC
Gly
>WENV183051806
OLGJ01003621
488746
Bacteroidota
CTG
Gln
>WENV183051814
OLGJ01003792
175903
Bacteroidota
GTG
His
>WENV183051822
OLGJ01003935
73011
Bacteroidota
CAA
Leu
>WENV183051825
OLGJ01004040
399200
Bacteroidota
CAT
Met
>WENV183051840
OLGJ01004226
117741
Bacteroidota
TAG
Leu
>WENV183051847
OLGJ01004441
159415
Bacteroidota
TAC
Val
>WENV183051848
OLGJ01004441
159415
Bacteroidota
TAC
Val
>WENV183051850
OLGJ01004463
398828
Bacteroidota
CCG
Arg
>WENV183051876
OLGJ01005300
480325
Bacteroidota
CTG
Gln
>WENV183051893
OLGJ01006413
398871
Bacteroidota
TTC
Glu
>WENV183051920
OLGJ01007456
175902
Bacteroidota
GGC
Ala
>WENV183051938
OLGJ01008280
118089
Bacteroidota
TAG
Leu
>WENV183051941
OLGJ01008357
285750
Bacteroidota
CCC
Gly
>WENV183051961
OLGJ01009944
74084
Bacteroidota
CAG
Leu
>WENV183051969
OLGJ01010549
175906
Bacteroidota
GTG
His
>WENV183051979
OLGJ01011291
175908
Bacteroidota
GTC
Asp
>WENV183051991
OLGJ01012544
176192
Bacteroidota
TCT
Arg
>WENV183052049
OLGJ01019359
400161
Bacteroidota
GGT
Thr
>WENV183052051
OLGJ01019820
283316
Bacteroidota
CCA
Trp
>WENV183052095
OLGJ01029166
404226
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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