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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183137262
OLOG01002347
235097
Bacteroidota
TTT
Lys
>WENV183137414
OLOG01007299
235102
Bacteroidota
CGT
Thr
>WENV183137567
OLOG01030164
338155
Bacteroidota
CTC
Glu
>WENV183137332
OLOG01003775
415410
Bacteroidota
TTG
Gln
>WENV183137301
OLOG01003232
338124
Bacteroidota
CCG
Arg
>WENV183137605
OLOG01043771
338132
Bacteroidota
GCA
Cys
>WENV183137261
OLOG01002347
144656
Bacteroidota
GTG
His
>WENV183137319
OLOG01003629
80607
Bacteroidota
GTA
Tyr
>WENV183137330
OLOG01003735
95559
Bacteroidota
TAG
Leu
>WENV183137411
OLOG01007182
419272
Bacteroidota
CTG
Gln
>WENV183137577
OLOG01032935
144655
Bacteroidota
GGC
Ala
>WENV183137236
OLOG01002164
50727
Bacteroidota
TGA
Ser
>WENV183137362
OLOG01004584
16224
Bacteroidota
GGA
Ser
>WENV183137354
OLOG01004313
338125
Bacteroidota
CCT
Arg
>WENV183137576
OLOG01031792
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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