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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183264566
OLRS01000030
235097
Bacteroidota
TTT
Lys
>WENV183264642
OLRS01000152
235097
Bacteroidota
TTT
Lys
>WENV183264671
OLRS01000204
235097
Bacteroidota
TTT
Lys
>WENV183265246
OLRS01003498
235097
Bacteroidota
TTT
Lys
>WENV183264962
OLRS01001187
235102
Bacteroidota
CGT
Thr
>WENV183265273
OLRS01003953
235102
Bacteroidota
CGT
Thr
>WENV183265138
OLRS01002251
267954
Bacteroidota
GCC
Gly
>WENV183264544
OLRS01000009
144657
Bacteroidota
CGG
Pro
>WENV183264661
OLRS01000181
243025
Bacteroidota
CAT
Met
>WENV183264667
OLRS01000196
338155
Bacteroidota
CTC
Glu
>WENV183265475
OLRS01010584
153993
Bacteroidota
GAT
Ile
>WENV183264616
OLRS01000098
343138
Bacteroidota
CCT
Arg
>WENV183264712
OLRS01000305
58715
Bacteroidota
GAG
Leu
>WENV183264590
OLRS01000071
46165
Bacteroidota
TGA
Ser
>WENV183264605
OLRS01000089
95618
Bacteroidota
TAG
Leu
>WENV183264895
OLRS01000903
338486
Bacteroidota
CAT
Met
>WENV183264561
OLRS01000019
338486
Bacteroidota
CAT
Met
>WENV183264534
OLRS01000007
411543
Bacteroidota
CTG
Gln
>WENV183264549
OLRS01000009
59689
Bacteroidota
CAG
Leu
>WENV183264966
OLRS01001193
436206
Bacteroidota
TTG
Gln
>WENV183264563
OLRS01000022
20893
Bacteroidota
GGA
Ser
>WENV183264547
OLRS01000009
20893
Bacteroidota
GGA
Ser
>WENV183265424
OLRS01007810
344692
Bacteroidota
GGT
Thr
>WENV183265200
OLRS01002816
338124
Bacteroidota
CCG
Arg
>WENV183264626
OLRS01000122
338124
Bacteroidota
CCG
Arg
>WENV183264591
OLRS01000071
238121
Bacteroidota
CTT
Lys
>WENV183265269
OLRS01003896
126641
Bacteroidota
TAC
Val
>WENV183264793
OLRS01000478
338132
Bacteroidota
GCA
Cys
>WENV183264734
OLRS01000360
338132
Bacteroidota
GCA
Cys
>WENV183264607
OLRS01000092
338132
Bacteroidota
GCA
Cys
>WENV183265066
OLRS01001716
338132
Bacteroidota
GCA
Cys
>WENV183264953
OLRS01001136
338132
Bacteroidota
GCA
Cys
>WENV183264592
OLRS01000071
45423
Bacteroidota
TGA
Ser
>WENV183264856
OLRS01000735
193809
Bacteroidota
CAT
Met
>WENV183264568
OLRS01000032
58714
Bacteroidota
CAA
Leu
>WENV183265091
OLRS01001912
301449
Bacteroidota
CGG
Pro
>WENV183264603
OLRS01000087
301449
Bacteroidota
CGG
Pro
>WENV183264846
OLRS01000698
144933
Bacteroidota
TCT
Arg
>WENV183264720
OLRS01000316
144933
Bacteroidota
TCT
Arg
>WENV183265324
OLRS01004670
144656
Bacteroidota
GTG
His
>WENV183264792
OLRS01000477
235207
Bacteroidota
CAT
Met
>WENV183264579
OLRS01000050
144659
Bacteroidota
GTG
His
>WENV183264545
OLRS01000009
235180
Bacteroidota
CCA
Trp
>WENV183264926
OLRS01001024
144596
Bacteroidota
GGC
Ala
>WENV183264877
OLRS01000825
80607
Bacteroidota
GTA
Tyr
>WENV183264594
OLRS01000075
80607
Bacteroidota
GTA
Tyr
>WENV183264580
OLRS01000050
80614
Bacteroidota
>WENV183265224
OLRS01003079
52358
Bacteroidota
TGA
Ser
>WENV183264940
OLRS01001084
52358
Bacteroidota
TGA
Ser
>WENV183264806
OLRS01000524
52358
Bacteroidota
TGA
Ser
>WENV183264772
OLRS01000449
52358
Bacteroidota
TGA
Ser
>WENV183264728
OLRS01000345
52358
Bacteroidota
TGA
Ser
>WENV183264669
OLRS01000201
52358
Bacteroidota
TGA
Ser
>WENV183264928
OLRS01001028
154643
Bacteroidota
CAT
Met
>WENV183265243
OLRS01003404
144590
Bacteroidota
GTT
Asn
>WENV183265242
OLRS01003404
144590
Bacteroidota
GTT
Asn
>WENV183265152
OLRS01002349
95559
Bacteroidota
TAG
Leu
>WENV183264973
OLRS01001242
419272
Bacteroidota
CTG
Gln
>WENV183264716
OLRS01000307
419272
Bacteroidota
CTG
Gln
>WENV183264673
OLRS01000215
144655
Bacteroidota
GGC
Ala
>WENV183264615
OLRS01000098
338164
Bacteroidota
TTC
Glu
>WENV183264567
OLRS01000032
95875
Bacteroidota
TAG
Leu
>WENV183264682
OLRS01000247
151121
Bacteroidota
CAT
Met
>WENV183264977
OLRS01001268
139743
Bacteroidota
GGG
Pro
>WENV183264733
OLRS01000352
139743
Bacteroidota
GGG
Pro
>WENV183264622
OLRS01000118
139743
Bacteroidota
GGG
Pro
>WENV183264531
OLRS01000004
240012
Bacteroidota
CCC
Gly
>WENV183265320
OLRS01004519
44852
Bacteroidota
TAA
Leu
>WENV183264600
OLRS01000082
44852
Bacteroidota
TAA
Leu
>WENV183264532
OLRS01000004
147439
Bacteroidota
TCT
Arg
>WENV183264870
OLRS01000799
280513
Bacteroidota
TTT
Lys
>WENV183264627
OLRS01000125
411550
Bacteroidota
CTG
Gln
>WENV183264704
OLRS01000296
19528
Bacteroidota
GGA
Ser
>WENV183265153
OLRS01002383
425638
Bacteroidota
CTG
Gln
>WENV183264737
OLRS01000365
425638
Bacteroidota
CTG
Gln
>WENV183264668
OLRS01000200
425638
Bacteroidota
CTG
Gln
>WENV183264817
OLRS01000579
239647
Bacteroidota
TTT
Lys
>WENV183264533
OLRS01000005
239647
Bacteroidota
TTT
Lys
>WENV183265283
OLRS01004085
19317
Bacteroidota
GGA
Ser
>WENV183264658
OLRS01000177
353927
Bacteroidota
TTC
Glu
>WENV183265227
OLRS01003118
185921
Bacteroidota
GTC
Asp
>WENV183264967
OLRS01001205
23696
Bacteroidota
GCT
Ser
>WENV183264678
OLRS01000234
414426
Bacteroidota
CTG
Gln
>WENV183265136
OLRS01002232
16224
Bacteroidota
GGA
Ser
>WENV183265428
OLRS01008201
16220
Bacteroidota
GGA
Ser
>WENV183264891
OLRS01000876
338125
Bacteroidota
CCT
Arg
>WENV183264564
OLRS01000026
235129
Bacteroidota
GCC
Gly
>WENV183265308
OLRS01004373
411629
Bacteroidota
TTG
Gln
>WENV183264756
OLRS01000417
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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