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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183338448
OLWK01000092
56385
Bacteroidota
TGA
Ser
>WENV183338493
OLWK01000166
331443
Bacteroidota
CGT
Thr
>WENV183338510
OLWK01000191
365112
Bacteroidota
TTT
Lys
>WENV183338523
OLWK01000214
175902
Bacteroidota
GGC
Ala
>WENV183338525
OLWK01000217
404109
Bacteroidota
CTC
Glu
>WENV183338554
OLWK01000320
117741
Bacteroidota
TAG
Leu
>WENV183338567
OLWK01000358
280557
Bacteroidota
CAT
Met
>WENV183338585
OLWK01000450
156422
Bacteroidota
TAC
Val
>WENV183338593
OLWK01000475
481328
Bacteroidota
TTG
Gln
>WENV183338605
OLWK01000497
27502
Bacteroidota
GGA
Ser
>WENV183338669
OLWK01000777
56493
Bacteroidota
TGA
Ser
>WENV183338680
OLWK01000846
99847
Bacteroidota
GTA
Tyr
>WENV183338687
OLWK01000883
242241
Bacteroidota
GTC
Asp
>WENV183338688
OLWK01000883
242241
Bacteroidota
GTC
Asp
>WENV183338713
OLWK01001014
398836
Bacteroidota
GCA
Cys
>WENV183338726
OLWK01001091
118221
Bacteroidota
CAA
Leu
>WENV183338750
OLWK01001413
488746
Bacteroidota
CTG
Gln
>WENV183338768
OLWK01001628
69204
Bacteroidota
TGA
Ser
>WENV183338803
OLWK01002070
187400
Bacteroidota
GTT
Asn
>WENV183338819
OLWK01002318
20206
Bacteroidota
GGA
Ser
>WENV183338896
OLWK01004030
175903
Bacteroidota
GTG
His
>WENV183338930
OLWK01005036
175944
Bacteroidota
CAT
Met
>WENV183338946
OLWK01005586
483416
Bacteroidota
CTG
Gln
>WENV183338967
OLWK01006729
400161
Bacteroidota
GGT
Thr
>WENV183338968
OLWK01006729
312035
Bacteroidota
CCA
Trp
>WENV183339037
OLWK01009207
186874
Bacteroidota
CAT
Met
>WENV183339053
OLWK01010372
21127
Bacteroidota
GGA
Ser
>WENV183339072
OLWK01011707
399200
Bacteroidota
CAT
Met
>WENV183339136
OLWK01014716
73011
Bacteroidota
CAA
Leu
>WENV183339148
OLWK01015285
46648
Bacteroidota
TAA
Leu
>WENV183339285
OLWK01028896
175906
Bacteroidota
GTG
His
>WENV183339303
OLWK01032231
187400
Bacteroidota
GTT
Asn
>WENV183339331
OLWK01037394
74084
Bacteroidota
CAG
Leu
>WENV183339336
OLWK01038568
118089
Bacteroidota
TAG
Leu
>WENV183339355
OLWK01041667
178907
Bacteroidota
TCT
Arg
>WENV183339381
OLWK01048058
491385
Bacteroidota
TTG
Gln
>WENV183339387
OLWK01049235
289031
Bacteroidota
CAT
Met
>WENV183339395
OLWK01049775
280478
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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