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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183340648
OLWL01025637
404226
Bacteroidota
CCT
Arg
>WENV183340823
OLWL01052794
175904
Bacteroidota
CGG
Pro
>WENV183340571
OLWL01017655
400161
Bacteroidota
GGT
Thr
>WENV183339949
OLWL01001288
289031
Bacteroidota
CAT
Met
>WENV183339788
OLWL01000476
156422
Bacteroidota
TAC
Val
>WENV183339885
OLWL01000911
280557
Bacteroidota
CAT
Met
>WENV183339730
OLWL01000286
20206
Bacteroidota
GGA
Ser
>WENV183340012
OLWL01001866
483416
Bacteroidota
CTG
Gln
>WENV183339857
OLWL01000719
118221
Bacteroidota
CAA
Leu
>WENV183340044
OLWL01002107
175906
Bacteroidota
GTG
His
>WENV183339955
OLWL01001344
175903
Bacteroidota
GTG
His
>WENV183339995
OLWL01001658
351598
Bacteroidota
CGG
Pro
>WENV183340333
OLWL01007766
118089
Bacteroidota
TAG
Leu
>WENV183340077
OLWL01002660
280530
Bacteroidota
CCA
Trp
>WENV183339637
OLWL01000096
157895
Bacteroidota
TAC
Val
>WENV183340304
OLWL01006821
178907
Bacteroidota
TCT
Arg
>WENV183340482
OLWL01012928
405877
Bacteroidota
GGT
Thr
>WENV183339626
OLWL01000091
56385
Bacteroidota
TGA
Ser
>WENV183340809
OLWL01050761
182267
Bacteroidota
GTT
Asn
>WENV183340191
OLWL01004688
20449
Bacteroidota
GGA
Ser
>WENV183340572
OLWL01017655
312035
Bacteroidota
CCA
Trp
>WENV183340117
OLWL01003290
242241
Bacteroidota
GTC
Asp
>WENV183340165
OLWL01004001
242241
Bacteroidota
GTC
Asp
>WENV183340062
OLWL01002343
21127
Bacteroidota
GGA
Ser
>WENV183340171
OLWL01004144
175944
Bacteroidota
CAT
Met
>WENV183339829
OLWL01000633
175902
Bacteroidota
GGC
Ala
>WENV183340112
OLWL01003123
280451
Bacteroidota
CGT
Thr
>WENV183339875
OLWL01000808
99847
Bacteroidota
GTA
Tyr
>WENV183340463
OLWL01012475
399200
Bacteroidota
CAT
Met
>WENV183340015
OLWL01001922
404109
Bacteroidota
CTC
Glu
>WENV183340154
OLWL01003905
404109
Bacteroidota
CTC
Glu
>WENV183340119
OLWL01003333
186874
Bacteroidota
CAT
Met
>WENV183339961
OLWL01001378
46648
Bacteroidota
TAA
Leu
>WENV183340116
OLWL01003163
46648
Bacteroidota
TAA
Leu
>WENV183340917
OLWL01077743
488746
Bacteroidota
CTG
Gln
>WENV183340164
OLWL01004000
280478
Bacteroidota
GCC
Gly
>WENV183340090
OLWL01002787
187400
Bacteroidota
GTT
Asn
>WENV183340441
OLWL01011288
73011
Bacteroidota
CAA
Leu
>WENV183340624
OLWL01023812
183889
Bacteroidota
GGC
Ala
>WENV183339591
OLWL01000050
331443
Bacteroidota
CGT
Thr
>WENV183339677
OLWL01000161
398828
Bacteroidota
CCG
Arg
>WENV183340507
OLWL01014770
74084
Bacteroidota
CAG
Leu
>WENV183339893
OLWL01000932
481328
Bacteroidota
TTG
Gln
>WENV183340155
OLWL01003912
481328
Bacteroidota
TTG
Gln
>WENV183340759
OLWL01040160
491385
Bacteroidota
TTG
Gln
>WENV183340813
OLWL01052130
400088
Bacteroidota
GGT
Thr
>WENV183339886
OLWL01000915
69204
Bacteroidota
TGA
Ser
>WENV183340033
OLWL01002059
280446
Bacteroidota
TTT
Lys
>WENV183340034
OLWL01002063
484496
Bacteroidota
TTG
Gln
>WENV183339753
OLWL01000344
27502
Bacteroidota
GGA
Ser
>WENV183339964
OLWL01001388
365112
Bacteroidota
TTT
Lys
>WENV183339869
OLWL01000788
398836
Bacteroidota
GCA
Cys
>WENV183339688
OLWL01000196
170323
Bacteroidota
GGG
Pro
>WENV183340300
OLWL01006765
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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