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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183352659
OLXA01000003
235097
Bacteroidota
TTT
Lys
>WENV183352664
OLXA01000008
52358
Bacteroidota
TGA
Ser
>WENV183352665
OLXA01000008
144656
Bacteroidota
GTG
His
>WENV183352666
OLXA01000008
16224
Bacteroidota
GGA
Ser
>WENV183352671
OLXA01000013
419272
Bacteroidota
CTG
Gln
>WENV183352672
OLXA01000014
425638
Bacteroidota
CTG
Gln
>WENV183352676
OLXA01000020
19317
Bacteroidota
GGA
Ser
>WENV183352680
OLXA01000021
353927
Bacteroidota
TTC
Glu
>WENV183352683
OLXA01000022
235207
Bacteroidota
CAT
Met
>WENV183352688
OLXA01000028
338132
Bacteroidota
GCA
Cys
>WENV183352693
OLXA01000042
338125
Bacteroidota
CCT
Arg
>WENV183352694
OLXA01000044
235097
Bacteroidota
TTT
Lys
>WENV183352695
OLXA01000045
415410
Bacteroidota
TTG
Gln
>WENV183352708
OLXA01000072
301449
Bacteroidota
CGG
Pro
>WENV183352725
OLXA01000103
80607
Bacteroidota
GTA
Tyr
>WENV183352726
OLXA01000109
16220
Bacteroidota
GGA
Ser
>WENV183352752
OLXA01000173
80607
Bacteroidota
GTA
Tyr
>WENV183352767
OLXA01000234
154643
Bacteroidota
CAT
Met
>WENV183352799
OLXA01000388
52358
Bacteroidota
TGA
Ser
>WENV183352803
OLXA01000442
243025
Bacteroidota
CAT
Met
>WENV183352821
OLXA01000611
58714
Bacteroidota
CAA
Leu
>WENV183352827
OLXA01000645
338124
Bacteroidota
CCG
Arg
>WENV183352831
OLXA01000674
411550
Bacteroidota
CTG
Gln
>WENV183352837
OLXA01000740
338164
Bacteroidota
TTC
Glu
>WENV183352838
OLXA01000740
343138
Bacteroidota
CCT
Arg
>WENV183352839
OLXA01000743
144933
Bacteroidota
TCT
Arg
>WENV183352852
OLXA01000835
20893
Bacteroidota
GGA
Ser
>WENV183352866
OLXA01000975
147439
Bacteroidota
TCT
Arg
>WENV183352869
OLXA01000982
144596
Bacteroidota
GGC
Ala
>WENV183352872
OLXA01001086
59689
Bacteroidota
CAG
Leu
>WENV183352891
OLXA01001443
415410
Bacteroidota
TTG
Gln
>WENV183352894
OLXA01001579
144657
Bacteroidota
CGG
Pro
>WENV183352895
OLXA01001579
235180
Bacteroidota
CCA
Trp
>WENV183352913
OLXA01002016
240012
Bacteroidota
CCC
Gly
>WENV183352928
OLXA01002136
23696
Bacteroidota
GCT
Ser
>WENV183352929
OLXA01002136
338155
Bacteroidota
CTC
Glu
>WENV183352939
OLXA01002328
239647
Bacteroidota
TTT
Lys
>WENV183352944
OLXA01002554
238121
Bacteroidota
CTT
Lys
>WENV183352945
OLXA01002554
45423
Bacteroidota
TGA
Ser
>WENV183352949
OLXA01002778
338486
Bacteroidota
CAT
Met
>WENV183352956
OLXA01002918
414426
Bacteroidota
CTG
Gln
>WENV183352966
OLXA01002985
44852
Bacteroidota
TAA
Leu
>WENV183353013
OLXA01004740
80614
Bacteroidota
>WENV183353022
OLXA01005630
58715
Bacteroidota
GAG
Leu
>WENV183353030
OLXA01006123
425638
Bacteroidota
CTG
Gln
>WENV183353043
OLXA01007076
144933
Bacteroidota
TCT
Arg
>WENV183353047
OLXA01007124
301449
Bacteroidota
CGG
Pro
>WENV183353050
OLXA01007522
23696
Bacteroidota
GCT
Ser
>WENV183353055
OLXA01007828
235102
Bacteroidota
CGT
Thr
>WENV183353066
OLXA01008728
144659
Bacteroidota
GTG
His
>WENV183353069
OLXA01008892
147147
Bacteroidota
GTG
His
>WENV183353082
OLXA01009652
338132
Bacteroidota
GCA
Cys
>WENV183353097
OLXA01010971
239647
Bacteroidota
TTT
Lys
>WENV183353105
OLXA01011531
338125
Bacteroidota
CCT
Arg
>WENV183353120
OLXA01013500
146764
Bacteroidota
GTC
Asp
>WENV183353130
OLXA01014800
303954
Bacteroidota
GCC
Gly
>WENV183353132
OLXA01015039
235180
Bacteroidota
CCA
Trp
>WENV183353156
OLXA01019613
412235
Bacteroidota
>WENV183353164
OLXA01020772
235129
Bacteroidota
GCC
Gly
>WENV183353165
OLXA01020845
136244
Bacteroidota
TAC
Val
>WENV183353179
OLXA01022690
144639
Bacteroidota
GGC
Ala
>WENV183353197
OLXA01027031
413663
Bacteroidota
CTG
Gln
>WENV183353198
OLXA01027683
145504
Bacteroidota
TGT
Thr
>WENV183353214
OLXA01031182
344769
Bacteroidota
CTC
Glu
>WENV183353227
OLXA01033947
127023
Bacteroidota
GGG
Pro
>WENV183353240
OLXA01038854
237796
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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