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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183395921
OLZI01000780
295385
Bacteroidota
CCA
Trp
>WENV183395876
OLZI01000494
117741
Bacteroidota
TAG
Leu
>WENV183395858
OLZI01000374
398829
Bacteroidota
CCT
Arg
>WENV183396100
OLZI01002666
175838
Bacteroidota
GTT
Asn
>WENV183396101
OLZI01002666
175838
Bacteroidota
GTT
Asn
>WENV183396377
OLZI01011117
404226
Bacteroidota
CCT
Arg
>WENV183395869
OLZI01000462
400161
Bacteroidota
GGT
Thr
>WENV183396202
OLZI01004276
289031
Bacteroidota
CAT
Met
>WENV183395758
OLZI01000118
280553
Bacteroidota
TTT
Lys
>WENV183395692
OLZI01000028
280557
Bacteroidota
CAT
Met
>WENV183395719
OLZI01000074
280557
Bacteroidota
CAT
Met
>WENV183396006
OLZI01001504
280557
Bacteroidota
CAT
Met
>WENV183396065
OLZI01002284
20206
Bacteroidota
GGA
Ser
>WENV183395968
OLZI01001130
483416
Bacteroidota
CTG
Gln
>WENV183396203
OLZI01004310
175903
Bacteroidota
GTG
His
>WENV183396567
OLZI01033291
118089
Bacteroidota
TAG
Leu
>WENV183395804
OLZI01000205
178571
Bacteroidota
GTT
Asn
>WENV183396460
OLZI01017204
178907
Bacteroidota
TCT
Arg
>WENV183395665
OLZI01000011
56385
Bacteroidota
TGA
Ser
>WENV183395729
OLZI01000086
56072
Bacteroidota
TAA
Leu
>WENV183395791
OLZI01000187
57807
Bacteroidota
TGA
Ser
>WENV183395895
OLZI01000610
57807
Bacteroidota
TGA
Ser
>WENV183395897
OLZI01000610
57807
Bacteroidota
TGA
Ser
>WENV183396286
OLZI01006897
57807
Bacteroidota
TGA
Ser
>WENV183395906
OLZI01000655
175886
Bacteroidota
GGC
Ala
>WENV183395670
OLZI01000015
175902
Bacteroidota
GGC
Ala
>WENV183395937
OLZI01000970
283315
Bacteroidota
CGT
Thr
>WENV183395663
OLZI01000010
156128
Bacteroidota
GGG
Pro
>WENV183396477
OLZI01019399
280451
Bacteroidota
CGT
Thr
>WENV183395675
OLZI01000020
418894
Bacteroidota
TTC
Glu
>WENV183395676
OLZI01000020
418894
Bacteroidota
TTC
Glu
>WENV183396362
OLZI01010720
399200
Bacteroidota
CAT
Met
>WENV183395801
OLZI01000202
404109
Bacteroidota
CTC
Glu
>WENV183395802
OLZI01000202
404109
Bacteroidota
CTC
Glu
>WENV183396022
OLZI01001602
186874
Bacteroidota
CAT
Met
>WENV183396687
OLZI01067266
180199
Bacteroidota
CAT
Met
>WENV183395917
OLZI01000746
488746
Bacteroidota
CTG
Gln
>WENV183395883
OLZI01000532
20766
Bacteroidota
GGA
Ser
>WENV183395913
OLZI01000697
187400
Bacteroidota
GTT
Asn
>WENV183396244
OLZI01005618
187814
Bacteroidota
GTC
Asp
>WENV183396041
OLZI01001856
183889
Bacteroidota
GGC
Ala
>WENV183395884
OLZI01000538
178134
Bacteroidota
TGG
Pro
>WENV183395695
OLZI01000032
158068
Bacteroidota
GGG
Pro
>WENV183395752
OLZI01000107
158068
Bacteroidota
GGG
Pro
>WENV183395868
OLZI01000462
118220
Bacteroidota
GTA
Tyr
>WENV183395795
OLZI01000196
398828
Bacteroidota
CCG
Arg
>WENV183395932
OLZI01000893
398828
Bacteroidota
CCG
Arg
>WENV183395762
OLZI01000140
481044
Bacteroidota
>WENV183395900
OLZI01000626
159415
Bacteroidota
TAC
Val
>WENV183395691
OLZI01000028
280446
Bacteroidota
TTT
Lys
>WENV183395700
OLZI01000040
484496
Bacteroidota
TTG
Gln
>WENV183396383
OLZI01011886
285750
Bacteroidota
CCC
Gly
>WENV183395853
OLZI01000353
188555
Bacteroidota
CAT
Met
>WENV183396033
OLZI01001710
398836
Bacteroidota
GCA
Cys
>WENV183396049
OLZI01001955
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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