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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183413855
OMAO01000266
95987
Bacteroidota
CAA
Leu
>WENV183413757
OMAO01000076
144695
Bacteroidota
CAT
Met
>WENV183413845
OMAO01000248
235207
Bacteroidota
CAT
Met
>WENV183413830
OMAO01000202
237797
Bacteroidota
CCA
Trp
>WENV183413705
OMAO01000019
412236
Bacteroidota
CCC
Gly
>WENV183414228
OMAO01009071
338124
Bacteroidota
CCG
Arg
>WENV183413774
OMAO01000100
338125
Bacteroidota
CCT
Arg
>WENV183413962
OMAO01000716
301449
Bacteroidota
CGG
Pro
>WENV183413944
OMAO01000565
235102
Bacteroidota
CGT
Thr
>WENV183413736
OMAO01000054
344769
Bacteroidota
CTC
Glu
>WENV183413838
OMAO01000237
413663
Bacteroidota
CTG
Gln
>WENV183413812
OMAO01000168
419272
Bacteroidota
CTG
Gln
>WENV183413687
OMAO01000009
425638
Bacteroidota
CTG
Gln
>WENV183413737
OMAO01000054
251266
Bacteroidota
CTT
Lys
>WENV183413775
OMAO01000101
338132
Bacteroidota
GCA
Cys
>WENV183413920
OMAO01000467
16224
Bacteroidota
GGA
Ser
>WENV183413836
OMAO01000214
16220
Bacteroidota
GGA
Ser
>WENV183413998
OMAO01000952
144655
Bacteroidota
GGC
Ala
>WENV183413811
OMAO01000168
132360
Bacteroidota
GGG
Pro
>WENV183413829
OMAO01000202
339412
Bacteroidota
GGT
Thr
>WENV183414407
OMAO01036103
344692
Bacteroidota
GGT
Thr
>WENV183414038
OMAO01001343
80607
Bacteroidota
GTA
Tyr
>WENV183413738
OMAO01000054
196394
Bacteroidota
GTC
Asp
>WENV183413679
OMAO01000002
147147
Bacteroidota
GTG
His
>WENV183413858
OMAO01000280
144656
Bacteroidota
GTG
His
>WENV183413767
OMAO01000094
37076
Bacteroidota
TAA
Leu
>WENV183413879
OMAO01000315
136244
Bacteroidota
TAC
Val
>WENV183414406
OMAO01035564
127221
Bacteroidota
TAC
Val
>WENV183413915
OMAO01000449
95559
Bacteroidota
TAG
Leu
>WENV183414402
OMAO01034777
147439
Bacteroidota
TCT
Arg
>WENV183414433
OMAO01041043
46165
Bacteroidota
TGA
Ser
>WENV183413727
OMAO01000035
48914
Bacteroidota
TGA
Ser
>WENV183414252
OMAO01010807
175704
Bacteroidota
TGC
Ala
>WENV183414273
OMAO01011807
128251
Bacteroidota
TGG
Pro
>WENV183414364
OMAO01028301
338164
Bacteroidota
TTC
Glu
>WENV183414365
OMAO01028301
353927
Bacteroidota
TTC
Glu
>WENV183413832
OMAO01000209
415410
Bacteroidota
TTG
Gln
>WENV183413747
OMAO01000067
412479
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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