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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183418127
OMAY01000014
144695
Bacteroidota
CAT
Met
>WENV183418130
OMAY01000016
97336
Bacteroidota
CAG
Leu
>WENV183418131
OMAY01000016
59498
Bacteroidota
GAG
Leu
>WENV183418151
OMAY01000030
136244
Bacteroidota
TAC
Val
>WENV183418150
OMAY01000030
136244
Bacteroidota
TAC
Val
>WENV183418192
OMAY01000060
238606
Bacteroidota
CGG
Pro
>WENV183418191
OMAY01000060
313363
Bacteroidota
GAA
Phe
>WENV183418198
OMAY01000069
415558
Bacteroidota
TTG
Gln
>WENV183418201
OMAY01000084
413663
Bacteroidota
CTG
Gln
>WENV183418213
OMAY01000113
301449
Bacteroidota
CGG
Pro
>WENV183418217
OMAY01000120
344769
Bacteroidota
CTC
Glu
>WENV183418242
OMAY01000168
37076
Bacteroidota
TAA
Leu
>WENV183418254
OMAY01000237
425638
Bacteroidota
CTG
Gln
>WENV183418282
OMAY01000353
235097
Bacteroidota
TTT
Lys
>WENV183418345
OMAY01000648
436206
Bacteroidota
TTG
Gln
>WENV183418375
OMAY01000874
235207
Bacteroidota
CAT
Met
>WENV183418376
OMAY01000884
235097
Bacteroidota
TTT
Lys
>WENV183418382
OMAY01000977
235097
Bacteroidota
TTT
Lys
>WENV183418396
OMAY01001104
243025
Bacteroidota
CAT
Met
>WENV183418400
OMAY01001133
150485
Bacteroidota
GTT
Asn
>WENV183418446
OMAY01001633
235180
Bacteroidota
CCA
Trp
>WENV183418452
OMAY01001762
154643
Bacteroidota
CAT
Met
>WENV183418464
OMAY01001859
95559
Bacteroidota
TAG
Leu
>WENV183418477
OMAY01002012
55270
Bacteroidota
TGA
Ser
>WENV183418483
OMAY01002073
313363
Bacteroidota
GAA
Phe
>WENV183418485
OMAY01002118
55270
Bacteroidota
TGA
Ser
>WENV183418506
OMAY01002340
126641
Bacteroidota
TAC
Val
>WENV183418509
OMAY01002372
411550
Bacteroidota
CTG
Gln
>WENV183418532
OMAY01002749
338132
Bacteroidota
GCA
Cys
>WENV183418544
OMAY01003100
338124
Bacteroidota
CCG
Arg
>WENV183418559
OMAY01003238
55270
Bacteroidota
TGA
Ser
>WENV183418578
OMAY01003403
414426
Bacteroidota
CTG
Gln
>WENV183418597
OMAY01003675
150485
Bacteroidota
GTT
Asn
>WENV183418600
OMAY01003709
144656
Bacteroidota
GTG
His
>WENV183418601
OMAY01003743
425638
Bacteroidota
CTG
Gln
>WENV183418602
OMAY01003768
16224
Bacteroidota
GGA
Ser
>WENV183418620
OMAY01004326
144659
Bacteroidota
GTG
His
>WENV183418623
OMAY01004404
353927
Bacteroidota
TTC
Glu
>WENV183418641
OMAY01004977
239647
Bacteroidota
TTT
Lys
>WENV183418660
OMAY01005544
16999
Bacteroidota
GGA
Ser
>WENV183418667
OMAY01005669
58714
Bacteroidota
CAA
Leu
>WENV183418679
OMAY01006103
20893
Bacteroidota
GGA
Ser
>WENV183418713
OMAY01007617
144655
Bacteroidota
GGC
Ala
>WENV183418721
OMAY01008112
343138
Bacteroidota
CCT
Arg
>WENV183418736
OMAY01009156
338164
Bacteroidota
TTC
Glu
>WENV183418795
OMAY01011575
338486
Bacteroidota
CAT
Met
>WENV183418801
OMAY01011932
59689
Bacteroidota
CAG
Leu
>WENV183418834
OMAY01014775
240012
Bacteroidota
CCC
Gly
>WENV183418861
OMAY01016376
144657
Bacteroidota
CGG
Pro
>WENV183418880
OMAY01018075
58715
Bacteroidota
GAG
Leu
>WENV183418911
OMAY01020426
147439
Bacteroidota
TCT
Arg
>WENV183418967
OMAY01026225
46165
Bacteroidota
TGA
Ser
>WENV183418973
OMAY01027793
344692
Bacteroidota
GGT
Thr
>WENV183419004
OMAY01032478
17323
Bacteroidota
GGA
Ser
>WENV183419052
OMAY01039812
235165
Bacteroidota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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