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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183419732
OMAZ01028753
341950
Bacteroidota
>WENV183419407
OMAZ01000589
341950
Bacteroidota
>WENV183419829
OMAZ01054902
58714
Bacteroidota
CAA
Leu
>WENV183419332
OMAZ01000271
243025
Bacteroidota
CAT
Met
>WENV183419398
OMAZ01000544
235207
Bacteroidota
CAT
Met
>WENV183419834
OMAZ01057307
154643
Bacteroidota
CAT
Met
>WENV183419667
OMAZ01016596
235165
Bacteroidota
CCA
Trp
>WENV183419590
OMAZ01009968
240012
Bacteroidota
CCC
Gly
>WENV183419333
OMAZ01000273
235102
Bacteroidota
CGT
Thr
>WENV183419300
OMAZ01000190
419272
Bacteroidota
CTG
Gln
>WENV183419303
OMAZ01000196
414426
Bacteroidota
CTG
Gln
>WENV183419625
OMAZ01012043
153993
Bacteroidota
GAT
Ile
>WENV183419367
OMAZ01000363
338132
Bacteroidota
GCA
Cys
>WENV183419211
OMAZ01000064
235129
Bacteroidota
GCC
Gly
>WENV183419210
OMAZ01000062
17323
Bacteroidota
GGA
Ser
>WENV183419320
OMAZ01000227
16999
Bacteroidota
GGA
Ser
>WENV183419214
OMAZ01000065
16224
Bacteroidota
GGA
Ser
>WENV183419301
OMAZ01000190
16220
Bacteroidota
GGA
Ser
>WENV183419419
OMAZ01000764
144655
Bacteroidota
GGC
Ala
>WENV183419408
OMAZ01000589
132360
Bacteroidota
GGG
Pro
>WENV183419250
OMAZ01000113
132360
Bacteroidota
GGG
Pro
>WENV183419388
OMAZ01000490
344692
Bacteroidota
GGT
Thr
>WENV183419383
OMAZ01000467
338165
Bacteroidota
GGT
Thr
>WENV183419302
OMAZ01000192
80607
Bacteroidota
GTA
Tyr
>WENV183419726
OMAZ01027734
185921
Bacteroidota
GTC
Asp
>WENV183419213
OMAZ01000065
144656
Bacteroidota
GTG
His
>WENV183419690
OMAZ01018778
144659
Bacteroidota
GTG
His
>WENV183419289
OMAZ01000171
144590
Bacteroidota
GTT
Asn
>WENV183419822
OMAZ01053075
150485
Bacteroidota
GTT
Asn
>WENV183419281
OMAZ01000160
126641
Bacteroidota
TAC
Val
>WENV183419340
OMAZ01000282
95559
Bacteroidota
TAG
Leu
>WENV183419571
OMAZ01008322
147439
Bacteroidota
TCT
Arg
>WENV183419444
OMAZ01001283
50727
Bacteroidota
TGA
Ser
>WENV183419311
OMAZ01000218
50727
Bacteroidota
TGA
Ser
>WENV183419189
OMAZ01000050
50727
Bacteroidota
TGA
Ser
>WENV183419791
OMAZ01043951
145504
Bacteroidota
TGT
Thr
>WENV183419744
OMAZ01031074
354570
Bacteroidota
TTC
Glu
>WENV183419173
OMAZ01000036
415410
Bacteroidota
TTG
Gln
>WENV183419370
OMAZ01000394
411629
Bacteroidota
TTG
Gln
>WENV183419276
OMAZ01000149
235097
Bacteroidota
TTT
Lys
>WENV183419278
OMAZ01000153
239647
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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