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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183422740
OMBF01000148
95987
Bacteroidota
CAA
Leu
>WENV183422911
OMBF01009948
338486
Bacteroidota
CAT
Met
>WENV183422814
OMBF01001950
237797
Bacteroidota
CCA
Trp
>WENV183422873
OMBF01005418
235180
Bacteroidota
CCA
Trp
>WENV183423023
OMBF01034652
338125
Bacteroidota
CCT
Arg
>WENV183422964
OMBF01019527
338155
Bacteroidota
CTC
Glu
>WENV183422777
OMBF01000644
344769
Bacteroidota
CTC
Glu
>WENV183422829
OMBF01002550
413663
Bacteroidota
CTG
Gln
>WENV183422881
OMBF01006124
425638
Bacteroidota
CTG
Gln
>WENV183422956
OMBF01017499
414426
Bacteroidota
CTG
Gln
>WENV183422928
OMBF01012885
23696
Bacteroidota
GCT
Ser
>WENV183422821
OMBF01002239
16999
Bacteroidota
GGA
Ser
>WENV183422739
OMBF01000131
339412
Bacteroidota
GGT
Thr
>WENV183422810
OMBF01001659
80607
Bacteroidota
GTA
Tyr
>WENV183422779
OMBF01000658
196394
Bacteroidota
GTC
Asp
>WENV183422882
OMBF01006287
185921
Bacteroidota
GTC
Asp
>WENV183422780
OMBF01000676
147147
Bacteroidota
GTG
His
>WENV183422729
OMBF01000055
37076
Bacteroidota
TAA
Leu
>WENV183422862
OMBF01004150
136244
Bacteroidota
TAC
Val
>WENV183422898
OMBF01008610
147439
Bacteroidota
TCT
Arg
>WENV183422869
OMBF01004988
45423
Bacteroidota
TGA
Ser
>WENV183423004
OMBF01027481
52358
Bacteroidota
TGA
Ser
>WENV183422886
OMBF01006536
175704
Bacteroidota
TGC
Ala
>WENV183422971
OMBF01020521
145504
Bacteroidota
TGT
Thr
>WENV183422972
OMBF01020722
353927
Bacteroidota
TTC
Glu
>WENV183422855
OMBF01003538
415410
Bacteroidota
TTG
Gln
>WENV183422755
OMBF01000266
412479
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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