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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183466989
OMEC01031697
398829
Bacteroidota
CCT
Arg
>WENV183466270
OMEC01000121
400161
Bacteroidota
GGT
Thr
>WENV183466306
OMEC01000205
289031
Bacteroidota
CAT
Met
>WENV183466314
OMEC01000234
289031
Bacteroidota
CAT
Met
>WENV183466359
OMEC01000386
156422
Bacteroidota
TAC
Val
>WENV183466360
OMEC01000386
156422
Bacteroidota
TAC
Val
>WENV183466971
OMEC01026645
280557
Bacteroidota
CAT
Met
>WENV183466203
OMEC01000032
483416
Bacteroidota
CTG
Gln
>WENV183466378
OMEC01000453
483416
Bacteroidota
CTG
Gln
>WENV183467047
OMEC01047831
398871
Bacteroidota
TTC
Glu
>WENV183466289
OMEC01000159
118221
Bacteroidota
CAA
Leu
>WENV183466935
OMEC01021097
351598
Bacteroidota
CGG
Pro
>WENV183466438
OMEC01000765
405877
Bacteroidota
GGT
Thr
>WENV183466316
OMEC01000241
56385
Bacteroidota
TGA
Ser
>WENV183466946
OMEC01023349
20449
Bacteroidota
GGA
Ser
>WENV183466271
OMEC01000121
312035
Bacteroidota
CCA
Trp
>WENV183466474
OMEC01001032
242241
Bacteroidota
GTC
Asp
>WENV183466499
OMEC01001213
242241
Bacteroidota
GTC
Asp
>WENV183466228
OMEC01000058
21127
Bacteroidota
GGA
Ser
>WENV183466680
OMEC01005011
99847
Bacteroidota
GTA
Tyr
>WENV183466273
OMEC01000122
404109
Bacteroidota
CTC
Glu
>WENV183466574
OMEC01002221
186874
Bacteroidota
CAT
Met
>WENV183466253
OMEC01000094
46648
Bacteroidota
TAA
Leu
>WENV183466562
OMEC01001910
158068
Bacteroidota
GGG
Pro
>WENV183467005
OMEC01033579
176192
Bacteroidota
TCT
Arg
>WENV183466252
OMEC01000094
481328
Bacteroidota
TTG
Gln
>WENV183466930
OMEC01020024
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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