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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183475974
OMEW01004095
117741
Bacteroidota
TAG
Leu
>WENV183475655
OMEW01000195
398829
Bacteroidota
CCT
Arg
>WENV183475805
OMEW01000887
175838
Bacteroidota
GTT
Asn
>WENV183476038
OMEW01007371
404226
Bacteroidota
CCT
Arg
>WENV183476061
OMEW01008598
175904
Bacteroidota
CGG
Pro
>WENV183475583
OMEW01000081
289031
Bacteroidota
CAT
Met
>WENV183476025
OMEW01006862
280557
Bacteroidota
CAT
Met
>WENV183475955
OMEW01003620
20492
Bacteroidota
GGA
Ser
>WENV183475541
OMEW01000043
483416
Bacteroidota
CTG
Gln
>WENV183476238
OMEW01040871
398871
Bacteroidota
TTC
Glu
>WENV183475881
OMEW01001791
56493
Bacteroidota
TGA
Ser
>WENV183476166
OMEW01021187
175903
Bacteroidota
GTG
His
>WENV183475498
OMEW01000026
351598
Bacteroidota
CGG
Pro
>WENV183475992
OMEW01005309
351598
Bacteroidota
CGG
Pro
>WENV183476235
OMEW01039994
118089
Bacteroidota
TAG
Leu
>WENV183476062
OMEW01008598
280530
Bacteroidota
CCA
Trp
>WENV183476253
OMEW01046696
29791
Bacteroidota
GCT
Ser
>WENV183476020
OMEW01006662
20449
Bacteroidota
GGA
Ser
>WENV183475637
OMEW01000147
56072
Bacteroidota
TAA
Leu
>WENV183475756
OMEW01000521
57807
Bacteroidota
TGA
Ser
>WENV183475688
OMEW01000298
175902
Bacteroidota
GGC
Ala
>WENV183476154
OMEW01018942
480404
Bacteroidota
TTG
Gln
>WENV183475862
OMEW01001599
280451
Bacteroidota
CGT
Thr
>WENV183475725
OMEW01000408
418894
Bacteroidota
TTC
Glu
>WENV183475726
OMEW01000408
418894
Bacteroidota
TTC
Glu
>WENV183475804
OMEW01000871
99847
Bacteroidota
GTA
Tyr
>WENV183475925
OMEW01002755
99847
Bacteroidota
GTA
Tyr
>WENV183476149
OMEW01017922
156078
Bacteroidota
TAC
Val
>WENV183475950
OMEW01003529
186874
Bacteroidota
CAT
Met
>WENV183475923
OMEW01002722
488746
Bacteroidota
CTG
Gln
>WENV183476052
OMEW01008018
186108
Bacteroidota
GTT
Asn
>WENV183475626
OMEW01000125
187400
Bacteroidota
GTT
Asn
>WENV183475781
OMEW01000706
175844
Bacteroidota
GGC
Ala
>WENV183476172
OMEW01022504
398828
Bacteroidota
CCG
Arg
>WENV183476230
OMEW01037836
74084
Bacteroidota
CAG
Leu
>WENV183476022
OMEW01006805
480325
Bacteroidota
CTG
Gln
>WENV183475994
OMEW01005409
280446
Bacteroidota
TTT
Lys
>WENV183476036
OMEW01007240
484496
Bacteroidota
TTG
Gln
>WENV183476224
OMEW01036957
416636
Bacteroidota
TTC
Glu
>WENV183475567
OMEW01000068
365112
Bacteroidota
TTT
Lys
>WENV183475667
OMEW01000210
365112
Bacteroidota
TTT
Lys
>WENV183475829
OMEW01001191
365112
Bacteroidota
TTT
Lys
>WENV183475716
OMEW01000388
398836
Bacteroidota
GCA
Cys
>WENV183475752
OMEW01000495
398836
Bacteroidota
GCA
Cys
>WENV183475602
OMEW01000100
170323
Bacteroidota
GGG
Pro
>WENV183475621
OMEW01000121
170323
Bacteroidota
GGG
Pro
>WENV183476195
OMEW01029448
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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