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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183478161
OMFD01000399
285360
Bacteroidota
TTT
Lys
>WENV183478296
OMFD01000998
117741
Bacteroidota
TAG
Leu
>WENV183478375
OMFD01001878
398829
Bacteroidota
CCT
Arg
>WENV183478629
OMFD01010992
404226
Bacteroidota
CCT
Arg
>WENV183478565
OMFD01006941
280557
Bacteroidota
CAT
Met
>WENV183478518
OMFD01005540
20492
Bacteroidota
GGA
Ser
>WENV183478572
OMFD01007123
398871
Bacteroidota
TTC
Glu
>WENV183478016
OMFD01000056
56493
Bacteroidota
TGA
Ser
>WENV183478402
OMFD01002266
56493
Bacteroidota
TGA
Ser
>WENV183478132
OMFD01000307
175903
Bacteroidota
GTG
His
>WENV183478645
OMFD01013495
156068
Bacteroidota
TAC
Val
>WENV183478335
OMFD01001410
118089
Bacteroidota
TAG
Leu
>WENV183478407
OMFD01002341
156406
Bacteroidota
TAC
Val
>WENV183478665
OMFD01016175
405877
Bacteroidota
GGT
Thr
>WENV183478023
OMFD01000070
29791
Bacteroidota
GCT
Ser
>WENV183477972
OMFD01000006
182267
Bacteroidota
GTT
Asn
>WENV183477973
OMFD01000008
182267
Bacteroidota
GTT
Asn
>WENV183478775
OMFD01039831
20449
Bacteroidota
GGA
Ser
>WENV183478687
OMFD01020167
178133
Bacteroidota
GAT
Ile
>WENV183478464
OMFD01003896
56072
Bacteroidota
TAA
Leu
>WENV183478433
OMFD01002862
175902
Bacteroidota
GGC
Ala
>WENV183478714
OMFD01024487
179697
Bacteroidota
TGT
Thr
>WENV183478024
OMFD01000070
398860
Bacteroidota
CTC
Glu
>WENV183478617
OMFD01009603
280451
Bacteroidota
CGT
Thr
>WENV183478369
OMFD01001756
99847
Bacteroidota
GTA
Tyr
>WENV183478550
OMFD01006336
399200
Bacteroidota
CAT
Met
>WENV183478591
OMFD01007784
399200
Bacteroidota
CAT
Met
>WENV183478427
OMFD01002754
280478
Bacteroidota
GCC
Gly
>WENV183478108
OMFD01000237
175844
Bacteroidota
GGC
Ala
>WENV183478189
OMFD01000522
73011
Bacteroidota
CAA
Leu
>WENV183478801
OMFD01051745
186142
Bacteroidota
GAT
Ile
>WENV183478512
OMFD01005270
398828
Bacteroidota
CCG
Arg
>WENV183478481
OMFD01004167
74084
Bacteroidota
CAG
Leu
>WENV183478562
OMFD01006864
480325
Bacteroidota
CTG
Gln
>WENV183477985
OMFD01000030
176192
Bacteroidota
TCT
Arg
>WENV183478247
OMFD01000738
280446
Bacteroidota
TTT
Lys
>WENV183478540
OMFD01006003
280446
Bacteroidota
TTT
Lys
>WENV183478496
OMFD01004730
484496
Bacteroidota
TTG
Gln
>WENV183478497
OMFD01004736
285750
Bacteroidota
CCC
Gly
>WENV183478547
OMFD01006319
285750
Bacteroidota
CCC
Gly
>WENV183478373
OMFD01001846
398836
Bacteroidota
GCA
Cys
>WENV183478589
OMFD01007746
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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