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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183478917
OMFF01000089
280553
Bacteroidota
TTT
Lys
>WENV183479250
OMFF01007076
56493
Bacteroidota
TGA
Ser
>WENV183479301
OMFF01010327
175903
Bacteroidota
GTG
His
>WENV183478918
OMFF01000092
351598
Bacteroidota
CGG
Pro
>WENV183478960
OMFF01000249
157895
Bacteroidota
TAC
Val
>WENV183478961
OMFF01000249
157895
Bacteroidota
TAC
Val
>WENV183479064
OMFF01001114
182267
Bacteroidota
GTT
Asn
>WENV183479065
OMFF01001114
182267
Bacteroidota
GTT
Asn
>WENV183479401
OMFF01020718
56072
Bacteroidota
TAA
Leu
>WENV183478854
OMFF01000014
175886
Bacteroidota
GGC
Ala
>WENV183479247
OMFF01006793
175902
Bacteroidota
GGC
Ala
>WENV183478924
OMFF01000101
174201
Bacteroidota
GGG
Pro
>WENV183478868
OMFF01000027
187400
Bacteroidota
GTT
Asn
>WENV183478869
OMFF01000027
187400
Bacteroidota
GTT
Asn
>WENV183478985
OMFF01000339
280446
Bacteroidota
TTT
Lys
>WENV183479011
OMFF01000463
280446
Bacteroidota
TTT
Lys
>WENV183479215
OMFF01005402
484496
Bacteroidota
TTG
Gln
>WENV183478891
OMFF01000048
27502
Bacteroidota
GGA
Ser
>WENV183479071
OMFF01001268
27502
Bacteroidota
GGA
Ser
>WENV183479060
OMFF01001027
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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