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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183480500
OMFJ01000116
398829
Bacteroidota
CCT
Arg
>WENV183480599
OMFJ01000669
398829
Bacteroidota
CCT
Arg
>WENV183480513
OMFJ01000161
175904
Bacteroidota
CGG
Pro
>WENV183480887
OMFJ01007779
289031
Bacteroidota
CAT
Met
>WENV183480744
OMFJ01002921
20492
Bacteroidota
GGA
Ser
>WENV183480822
OMFJ01005634
20206
Bacteroidota
GGA
Ser
>WENV183480460
OMFJ01000027
118089
Bacteroidota
TAG
Leu
>WENV183481072
OMFJ01031954
283316
Bacteroidota
CCA
Trp
>WENV183480761
OMFJ01003534
398872
Bacteroidota
GGT
Thr
>WENV183480575
OMFJ01000520
178907
Bacteroidota
TCT
Arg
>WENV183481015
OMFJ01019802
405877
Bacteroidota
GGT
Thr
>WENV183480629
OMFJ01000776
29791
Bacteroidota
GCT
Ser
>WENV183480886
OMFJ01007776
21127
Bacteroidota
GGA
Ser
>WENV183480647
OMFJ01001017
57807
Bacteroidota
TGA
Ser
>WENV183480809
OMFJ01004863
175902
Bacteroidota
GGC
Ala
>WENV183480630
OMFJ01000776
398860
Bacteroidota
CTC
Glu
>WENV183480897
OMFJ01008185
280451
Bacteroidota
CGT
Thr
>WENV183480562
OMFJ01000426
418894
Bacteroidota
TTC
Glu
>WENV183480661
OMFJ01001173
99847
Bacteroidota
GTA
Tyr
>WENV183481037
OMFJ01023199
404109
Bacteroidota
CTC
Glu
>WENV183481101
OMFJ01039852
186874
Bacteroidota
CAT
Met
>WENV183480446
OMFJ01000019
332896
Bacteroidota
TTT
Lys
>WENV183480648
OMFJ01001018
280478
Bacteroidota
GCC
Gly
>WENV183480477
OMFJ01000047
187400
Bacteroidota
GTT
Asn
>WENV183480717
OMFJ01002187
175844
Bacteroidota
GGC
Ala
>WENV183480675
OMFJ01001323
107227
Bacteroidota
GTA
Tyr
>WENV183481166
OMFJ01058666
187814
Bacteroidota
GTC
Asp
>WENV183480697
OMFJ01001777
398828
Bacteroidota
CCG
Arg
>WENV183481146
OMFJ01052708
481044
Bacteroidota
>WENV183480610
OMFJ01000756
74084
Bacteroidota
CAG
Leu
>WENV183480597
OMFJ01000630
176192
Bacteroidota
TCT
Arg
>WENV183480556
OMFJ01000398
280446
Bacteroidota
TTT
Lys
>WENV183480571
OMFJ01000470
484496
Bacteroidota
TTG
Gln
>WENV183480594
OMFJ01000606
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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