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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183481760
OMFK01004674
117741
Bacteroidota
TAG
Leu
>WENV183481544
OMFK01000635
398829
Bacteroidota
CCT
Arg
>WENV183481223
OMFK01000004
289031
Bacteroidota
CAT
Met
>WENV183481505
OMFK01000391
280557
Bacteroidota
CAT
Met
>WENV183481604
OMFK01001153
20492
Bacteroidota
GGA
Ser
>WENV183481659
OMFK01001995
20206
Bacteroidota
GGA
Ser
>WENV183481359
OMFK01000062
483416
Bacteroidota
CTG
Gln
>WENV183481869
OMFK01015371
56493
Bacteroidota
TGA
Ser
>WENV183481509
OMFK01000407
175903
Bacteroidota
GTG
His
>WENV183481632
OMFK01001524
351598
Bacteroidota
CGG
Pro
>WENV183481309
OMFK01000029
172085
Bacteroidota
TAC
Val
>WENV183481398
OMFK01000099
405877
Bacteroidota
GGT
Thr
>WENV183481284
OMFK01000021
182267
Bacteroidota
GTT
Asn
>WENV183481352
OMFK01000055
21127
Bacteroidota
GGA
Ser
>WENV183481444
OMFK01000148
56072
Bacteroidota
TAA
Leu
>WENV183481451
OMFK01000161
175886
Bacteroidota
GGC
Ala
>WENV183481884
OMFK01016609
175902
Bacteroidota
GGC
Ala
>WENV183481234
OMFK01000006
179697
Bacteroidota
TGT
Thr
>WENV183481522
OMFK01000524
398860
Bacteroidota
CTC
Glu
>WENV183481313
OMFK01000033
174201
Bacteroidota
GGG
Pro
>WENV183481553
OMFK01000668
174201
Bacteroidota
GGG
Pro
>WENV183481437
OMFK01000137
418894
Bacteroidota
TTC
Glu
>WENV183481533
OMFK01000584
99847
Bacteroidota
GTA
Tyr
>WENV183481562
OMFK01000752
186874
Bacteroidota
CAT
Met
>WENV183481703
OMFK01002816
488746
Bacteroidota
CTG
Gln
>WENV183481517
OMFK01000456
175844
Bacteroidota
GGC
Ala
>WENV183481339
OMFK01000048
280515
Bacteroidota
CCA
Trp
>WENV183481940
OMFK01025925
183889
Bacteroidota
GGC
Ala
>WENV183481645
OMFK01001724
398828
Bacteroidota
CCG
Arg
>WENV183481876
OMFK01016507
159415
Bacteroidota
TAC
Val
>WENV183481481
OMFK01000306
176192
Bacteroidota
TCT
Arg
>WENV183481631
OMFK01001516
484496
Bacteroidota
TTG
Gln
>WENV183481362
OMFK01000064
27502
Bacteroidota
GGA
Ser
>WENV183481293
OMFK01000025
373714
Bacteroidota
GCC
Gly
>WENV183481335
OMFK01000048
373714
Bacteroidota
GCC
Gly
>WENV183481574
OMFK01000884
365112
Bacteroidota
TTT
Lys
>WENV183481605
OMFK01001159
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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