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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183482013
OMFL01000972
400161
Bacteroidota
GGT
Thr
>WENV183482065
OMFL01003722
20206
Bacteroidota
GGA
Ser
>WENV183482131
OMFL01016618
56493
Bacteroidota
TGA
Ser
>WENV183481986
OMFL01000143
178571
Bacteroidota
GTT
Asn
>WENV183481981
OMFL01000098
56385
Bacteroidota
TGA
Ser
>WENV183482119
OMFL01014031
175902
Bacteroidota
GGC
Ala
>WENV183481987
OMFL01000172
283315
Bacteroidota
CGT
Thr
>WENV183481985
OMFL01000133
156128
Bacteroidota
GGG
Pro
>WENV183482123
OMFL01015382
280451
Bacteroidota
CGT
Thr
>WENV183482133
OMFL01017716
404109
Bacteroidota
CTC
Glu
>WENV183482115
OMFL01013149
187814
Bacteroidota
GTC
Asp
>WENV183481990
OMFL01000332
178134
Bacteroidota
TGG
Pro
>WENV183481974
OMFL01000005
481044
Bacteroidota
>WENV183482141
OMFL01021339
484496
Bacteroidota
TTG
Gln
>WENV183482010
OMFL01000882
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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