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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183486344
OMFR01000384
117741
Bacteroidota
TAG
Leu
>WENV183486231
OMFR01000107
175838
Bacteroidota
GTT
Asn
>WENV183486874
OMFR01019903
175904
Bacteroidota
CGG
Pro
>WENV183486821
OMFR01013011
289031
Bacteroidota
CAT
Met
>WENV183486187
OMFR01000056
280557
Bacteroidota
CAT
Met
>WENV183486329
OMFR01000336
20206
Bacteroidota
GGA
Ser
>WENV183486632
OMFR01002958
483416
Bacteroidota
CTG
Gln
>WENV183486217
OMFR01000088
56493
Bacteroidota
TGA
Ser
>WENV183486487
OMFR01001244
175903
Bacteroidota
GTG
His
>WENV183486434
OMFR01000772
182267
Bacteroidota
GTT
Asn
>WENV183486679
OMFR01003894
20449
Bacteroidota
GGA
Ser
>WENV183486631
OMFR01002956
56072
Bacteroidota
TAA
Leu
>WENV183486208
OMFR01000074
57807
Bacteroidota
TGA
Ser
>WENV183486404
OMFR01000622
175886
Bacteroidota
GGC
Ala
>WENV183486507
OMFR01001404
175902
Bacteroidota
GGC
Ala
>WENV183486650
OMFR01003131
179697
Bacteroidota
TGT
Thr
>WENV183486522
OMFR01001580
280451
Bacteroidota
CGT
Thr
>WENV183486551
OMFR01001790
418894
Bacteroidota
TTC
Glu
>WENV183486714
OMFR01005275
99847
Bacteroidota
GTA
Tyr
>WENV183486871
OMFR01019066
399200
Bacteroidota
CAT
Met
>WENV183486460
OMFR01001088
186874
Bacteroidota
CAT
Met
>WENV183486744
OMFR01007389
332896
Bacteroidota
TTT
Lys
>WENV183486365
OMFR01000443
488746
Bacteroidota
CTG
Gln
>WENV183486818
OMFR01012433
280478
Bacteroidota
GCC
Gly
>WENV183486972
OMFR01037723
73011
Bacteroidota
CAA
Leu
>WENV183486642
OMFR01003043
280515
Bacteroidota
CCA
Trp
>WENV183486483
OMFR01001215
183889
Bacteroidota
GGC
Ala
>WENV183486206
OMFR01000073
158068
Bacteroidota
GGG
Pro
>WENV183486149
OMFR01000021
398828
Bacteroidota
CCG
Arg
>WENV183486592
OMFR01002298
398828
Bacteroidota
CCG
Arg
>WENV183486988
OMFR01042681
176192
Bacteroidota
TCT
Arg
>WENV183486222
OMFR01000093
280446
Bacteroidota
TTT
Lys
>WENV183486433
OMFR01000771
280446
Bacteroidota
TTT
Lys
>WENV183486283
OMFR01000200
484496
Bacteroidota
TTG
Gln
>WENV183486932
OMFR01029320
285750
Bacteroidota
CCC
Gly
>WENV183486474
OMFR01001183
398836
Bacteroidota
GCA
Cys
>WENV183486736
OMFR01006758
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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