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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183489401
OMGA01001834
117741
Bacteroidota
TAG
Leu
>WENV183489765
OMGA01018246
175904
Bacteroidota
CGG
Pro
>WENV183489251
OMGA01000427
289031
Bacteroidota
CAT
Met
>WENV183489366
OMGA01001451
289031
Bacteroidota
CAT
Met
>WENV183489431
OMGA01002368
156422
Bacteroidota
TAC
Val
>WENV183489945
OMGA01051809
280553
Bacteroidota
TTT
Lys
>WENV183489406
OMGA01001918
280557
Bacteroidota
CAT
Met
>WENV183489067
OMGA01000004
483416
Bacteroidota
CTG
Gln
>WENV183489253
OMGA01000438
483416
Bacteroidota
CTG
Gln
>WENV183489778
OMGA01019231
398871
Bacteroidota
TTC
Glu
>WENV183489838
OMGA01026774
201819
Bacteroidota
CAT
Met
>WENV183489332
OMGA01000984
118221
Bacteroidota
CAA
Leu
>WENV183489542
OMGA01005090
56493
Bacteroidota
TGA
Ser
>WENV183489839
OMGA01026813
280530
Bacteroidota
CCA
Trp
>WENV183489539
OMGA01004922
178907
Bacteroidota
TCT
Arg
>WENV183489495
OMGA01003753
405877
Bacteroidota
GGT
Thr
>WENV183489358
OMGA01001320
56385
Bacteroidota
TGA
Ser
>WENV183489498
OMGA01003864
20449
Bacteroidota
GGA
Ser
>WENV183489597
OMGA01007044
312035
Bacteroidota
CCA
Trp
>WENV183489883
OMGA01036117
178133
Bacteroidota
GAT
Ile
>WENV183489235
OMGA01000361
21127
Bacteroidota
GGA
Ser
>WENV183489677
OMGA01011025
175902
Bacteroidota
GGC
Ala
>WENV183489514
OMGA01004176
280451
Bacteroidota
CGT
Thr
>WENV183489195
OMGA01000260
99847
Bacteroidota
GTA
Tyr
>WENV183489219
OMGA01000310
399200
Bacteroidota
CAT
Met
>WENV183489930
OMGA01047653
186874
Bacteroidota
CAT
Met
>WENV183489059
OMGA01000002
178179
Bacteroidota
GGC
Ala
>WENV183489578
OMGA01006274
488746
Bacteroidota
CTG
Gln
>WENV183489852
OMGA01030075
280478
Bacteroidota
GCC
Gly
>WENV183489850
OMGA01029690
175844
Bacteroidota
GGC
Ala
>WENV183489768
OMGA01018762
73011
Bacteroidota
CAA
Leu
>WENV183489491
OMGA01003707
187814
Bacteroidota
GTC
Asp
>WENV183489658
OMGA01009240
183889
Bacteroidota
GGC
Ala
>WENV183489359
OMGA01001330
191205
Bacteroidota
TGG
Pro
>WENV183489557
OMGA01005604
74084
Bacteroidota
CAG
Leu
>WENV183489550
OMGA01005343
159415
Bacteroidota
TAC
Val
>WENV183489243
OMGA01000387
481328
Bacteroidota
TTG
Gln
>WENV183489653
OMGA01009123
484496
Bacteroidota
TTG
Gln
>WENV183489812
OMGA01022787
117804
Bacteroidota
TAG
Leu
>WENV183489180
OMGA01000201
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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