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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183490473
OMGB01015235
117741
Bacteroidota
TAG
Leu
>WENV183490114
OMGB01000401
398829
Bacteroidota
CCT
Arg
>WENV183490049
OMGB01000108
400161
Bacteroidota
GGT
Thr
>WENV183490322
OMGB01004640
280557
Bacteroidota
CAT
Met
>WENV183489988
OMGB01000005
118221
Bacteroidota
CAA
Leu
>WENV183490294
OMGB01003606
175903
Bacteroidota
GTG
His
>WENV183490020
OMGB01000054
56385
Bacteroidota
TGA
Ser
>WENV183490050
OMGB01000108
312035
Bacteroidota
CCA
Trp
>WENV183490010
OMGB01000030
175944
Bacteroidota
CAT
Met
>WENV183490367
OMGB01006544
175902
Bacteroidota
GGC
Ala
>WENV183490280
OMGB01003031
280451
Bacteroidota
CGT
Thr
>WENV183490479
OMGB01016108
418894
Bacteroidota
TTC
Glu
>WENV183490337
OMGB01005273
99847
Bacteroidota
GTA
Tyr
>WENV183489985
OMGB01000003
404109
Bacteroidota
CTC
Glu
>WENV183490245
OMGB01002034
46648
Bacteroidota
TAA
Leu
>WENV183490382
OMGB01007283
488746
Bacteroidota
CTG
Gln
>WENV183490540
OMGB01031639
280515
Bacteroidota
CCA
Trp
>WENV183489987
OMGB01000003
187814
Bacteroidota
GTC
Asp
>WENV183490016
OMGB01000047
481328
Bacteroidota
TTG
Gln
>WENV183490410
OMGB01009153
484496
Bacteroidota
TTG
Gln
>WENV183490403
OMGB01008772
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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