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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183491109
OMGG01000137
117741
Bacteroidota
TAG
Leu
>WENV183491024
OMGG01000030
398829
Bacteroidota
CCT
Arg
>WENV183491129
OMGG01000172
175838
Bacteroidota
GTT
Asn
>WENV183491445
OMGG01009522
400161
Bacteroidota
GGT
Thr
>WENV183490980
OMGG01000006
289031
Bacteroidota
CAT
Met
>WENV183491046
OMGG01000046
280557
Bacteroidota
CAT
Met
>WENV183491214
OMGG01000494
20206
Bacteroidota
GGA
Ser
>WENV183490975
OMGG01000005
483416
Bacteroidota
CTG
Gln
>WENV183491507
OMGG01019974
118221
Bacteroidota
CAA
Leu
>WENV183491273
OMGG01000903
175903
Bacteroidota
GTG
His
>WENV183491251
OMGG01000761
351598
Bacteroidota
CGG
Pro
>WENV183491242
OMGG01000730
118089
Bacteroidota
TAG
Leu
>WENV183491224
OMGG01000540
203954
Bacteroidota
GTC
Asp
>WENV183490993
OMGG01000012
405877
Bacteroidota
GGT
Thr
>WENV183491524
OMGG01024537
56385
Bacteroidota
TGA
Ser
>WENV183491062
OMGG01000069
29791
Bacteroidota
GCT
Ser
>WENV183491193
OMGG01000385
20449
Bacteroidota
GGA
Ser
>WENV183491387
OMGG01004389
312035
Bacteroidota
CCA
Trp
>WENV183491409
OMGG01006689
242241
Bacteroidota
GTC
Asp
>WENV183491410
OMGG01006689
242241
Bacteroidota
GTC
Asp
>WENV183490995
OMGG01000013
21127
Bacteroidota
GGA
Ser
>WENV183491071
OMGG01000078
175902
Bacteroidota
GGC
Ala
>WENV183491063
OMGG01000069
398860
Bacteroidota
CTC
Glu
>WENV183491003
OMGG01000018
174201
Bacteroidota
GGG
Pro
>WENV183491017
OMGG01000027
174201
Bacteroidota
GGG
Pro
>WENV183491466
OMGG01013185
280451
Bacteroidota
CGT
Thr
>WENV183490985
OMGG01000008
99847
Bacteroidota
GTA
Tyr
>WENV183491008
OMGG01000020
99847
Bacteroidota
GTA
Tyr
>WENV183491056
OMGG01000064
399200
Bacteroidota
CAT
Met
>WENV183491221
OMGG01000525
399200
Bacteroidota
CAT
Met
>WENV183490983
OMGG01000006
186874
Bacteroidota
CAT
Met
>WENV183491142
OMGG01000237
488746
Bacteroidota
CTG
Gln
>WENV183491022
OMGG01000028
280478
Bacteroidota
GCC
Gly
>WENV183491078
OMGG01000094
398828
Bacteroidota
CCG
Arg
>WENV183491015
OMGG01000025
176192
Bacteroidota
TCT
Arg
>WENV183491110
OMGG01000139
176192
Bacteroidota
TCT
Arg
>WENV183491026
OMGG01000031
69204
Bacteroidota
TGA
Ser
>WENV183490974
OMGG01000004
484496
Bacteroidota
TTG
Gln
>WENV183491164
OMGG01000294
484496
Bacteroidota
TTG
Gln
>WENV183491233
OMGG01000624
27502
Bacteroidota
GGA
Ser
>WENV183491265
OMGG01000836
285750
Bacteroidota
CCC
Gly
>WENV183491061
OMGG01000069
365112
Bacteroidota
TTT
Lys
>WENV183491238
OMGG01000722
365112
Bacteroidota
TTT
Lys
>WENV183491031
OMGG01000040
398836
Bacteroidota
GCA
Cys
>WENV183491036
OMGG01000042
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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