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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183491997
OMGH01001364
295385
Bacteroidota
CCA
Trp
>WENV183491677
OMGH01000150
117741
Bacteroidota
TAG
Leu
>WENV183491642
OMGH01000094
398829
Bacteroidota
CCT
Arg
>WENV183492003
OMGH01001384
289031
Bacteroidota
CAT
Met
>WENV183492183
OMGH01003565
280557
Bacteroidota
CAT
Met
>WENV183492184
OMGH01003565
280557
Bacteroidota
CAT
Met
>WENV183491818
OMGH01000419
20206
Bacteroidota
GGA
Ser
>WENV183492210
OMGH01004513
483416
Bacteroidota
CTG
Gln
>WENV183491821
OMGH01000433
56493
Bacteroidota
TGA
Ser
>WENV183492005
OMGH01001409
56493
Bacteroidota
TGA
Ser
>WENV183491726
OMGH01000229
175903
Bacteroidota
GTG
His
>WENV183491644
OMGH01000096
182267
Bacteroidota
GTT
Asn
>WENV183491645
OMGH01000096
182267
Bacteroidota
GTT
Asn
>WENV183491646
OMGH01000096
182267
Bacteroidota
GTT
Asn
>WENV183492203
OMGH01004298
57807
Bacteroidota
TGA
Ser
>WENV183491838
OMGH01000513
175902
Bacteroidota
GGC
Ala
>WENV183492364
OMGH01011914
398860
Bacteroidota
CTC
Glu
>WENV183491756
OMGH01000293
480404
Bacteroidota
TTG
Gln
>WENV183491986
OMGH01001243
280451
Bacteroidota
CGT
Thr
>WENV183491757
OMGH01000295
99847
Bacteroidota
GTA
Tyr
>WENV183491819
OMGH01000431
99847
Bacteroidota
GTA
Tyr
>WENV183492130
OMGH01002638
186874
Bacteroidota
CAT
Met
>WENV183492233
OMGH01005074
178179
Bacteroidota
GGC
Ala
>WENV183491594
OMGH01000043
398828
Bacteroidota
CCG
Arg
>WENV183492124
OMGH01002546
176192
Bacteroidota
TCT
Arg
>WENV183491614
OMGH01000069
280446
Bacteroidota
TTT
Lys
>WENV183491582
OMGH01000035
484496
Bacteroidota
TTG
Gln
>WENV183491571
OMGH01000027
398836
Bacteroidota
GCA
Cys
>WENV183491572
OMGH01000027
398836
Bacteroidota
GCA
Cys
>WENV183491941
OMGH01000963
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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