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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183493842
OMGJ01006450
295385
Bacteroidota
CCA
Trp
>WENV183493566
OMGJ01000423
404226
Bacteroidota
CCT
Arg
>WENV183493457
OMGJ01000086
175904
Bacteroidota
CGG
Pro
>WENV183493390
OMGJ01000002
289031
Bacteroidota
CAT
Met
>WENV183493454
OMGJ01000077
280557
Bacteroidota
CAT
Met
>WENV183493399
OMGJ01000004
483416
Bacteroidota
CTG
Gln
>WENV183493565
OMGJ01000423
398871
Bacteroidota
TTC
Glu
>WENV183493495
OMGJ01000166
175906
Bacteroidota
GTG
His
>WENV183493492
OMGJ01000159
351598
Bacteroidota
CGG
Pro
>WENV183493676
OMGJ01001281
118089
Bacteroidota
TAG
Leu
>WENV183493769
OMGJ01003071
169545
Bacteroidota
TGG
Pro
>WENV183493458
OMGJ01000086
280530
Bacteroidota
CCA
Trp
>WENV183493699
OMGJ01001537
175936
Bacteroidota
CAT
Met
>WENV183493628
OMGJ01000730
203954
Bacteroidota
GTC
Asp
>WENV183493567
OMGJ01000427
178907
Bacteroidota
TCT
Arg
>WENV183493386
OMGJ01000001
405877
Bacteroidota
GGT
Thr
>WENV183493733
OMGJ01002162
20449
Bacteroidota
GGA
Ser
>WENV183493403
OMGJ01000006
21127
Bacteroidota
GGA
Ser
>WENV183493788
OMGJ01003879
175886
Bacteroidota
GGC
Ala
>WENV183493626
OMGJ01000717
480404
Bacteroidota
TTG
Gln
>WENV183493806
OMGJ01004735
99847
Bacteroidota
GTA
Tyr
>WENV183493534
OMGJ01000275
399200
Bacteroidota
CAT
Met
>WENV183493522
OMGJ01000250
186874
Bacteroidota
CAT
Met
>WENV183493704
OMGJ01001631
399026
Bacteroidota
CCT
Arg
>WENV183493477
OMGJ01000128
280478
Bacteroidota
GCC
Gly
>WENV183493779
OMGJ01003578
175844
Bacteroidota
GGC
Ala
>WENV183493732
OMGJ01002152
280532
Bacteroidota
>WENV183493866
OMGJ01008059
73011
Bacteroidota
CAA
Leu
>WENV183493738
OMGJ01002332
480318
Bacteroidota
CTG
Gln
>WENV183493460
OMGJ01000086
74084
Bacteroidota
CAG
Leu
>WENV183493952
OMGJ01014943
400088
Bacteroidota
GGT
Thr
>WENV183493670
OMGJ01001141
69204
Bacteroidota
TGA
Ser
>WENV183493824
OMGJ01005714
69204
Bacteroidota
TGA
Ser
>WENV183493507
OMGJ01000203
280446
Bacteroidota
TTT
Lys
>WENV183493422
OMGJ01000025
27502
Bacteroidota
GGA
Ser
>WENV183493713
OMGJ01001710
27502
Bacteroidota
GGA
Ser
>WENV183493479
OMGJ01000129
117804
Bacteroidota
TAG
Leu
>WENV183493662
OMGJ01001109
365112
Bacteroidota
TTT
Lys
>WENV183493510
OMGJ01000210
398836
Bacteroidota
GCA
Cys
>WENV183493750
OMGJ01002630
398836
Bacteroidota
GCA
Cys
>WENV183493389
OMGJ01000001
170323
Bacteroidota
GGG
Pro
>WENV183493493
OMGJ01000164
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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