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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183495167
OMGL01000271
117741
Bacteroidota
TAG
Leu
>WENV183495529
OMGL01003026
398829
Bacteroidota
CCT
Arg
>WENV183495423
OMGL01001564
175838
Bacteroidota
GTT
Asn
>WENV183495424
OMGL01001564
175838
Bacteroidota
GTT
Asn
>WENV183495805
OMGL01014307
404226
Bacteroidota
CCT
Arg
>WENV183495606
OMGL01004591
175904
Bacteroidota
CGG
Pro
>WENV183495439
OMGL01001741
289031
Bacteroidota
CAT
Met
>WENV183495070
OMGL01000071
280557
Bacteroidota
CAT
Met
>WENV183495416
OMGL01001515
280557
Bacteroidota
CAT
Met
>WENV183495417
OMGL01001515
280557
Bacteroidota
CAT
Met
>WENV183495256
OMGL01000533
20206
Bacteroidota
GGA
Ser
>WENV183495260
OMGL01000573
483416
Bacteroidota
CTG
Gln
>WENV183495074
OMGL01000074
56493
Bacteroidota
TGA
Ser
>WENV183495193
OMGL01000321
56493
Bacteroidota
TGA
Ser
>WENV183495700
OMGL01008179
175903
Bacteroidota
GTG
His
>WENV183495047
OMGL01000056
351598
Bacteroidota
CGG
Pro
>WENV183495607
OMGL01004591
280530
Bacteroidota
CCA
Trp
>WENV183495831
OMGL01015996
178907
Bacteroidota
TCT
Arg
>WENV183495170
OMGL01000284
182267
Bacteroidota
GTT
Asn
>WENV183495171
OMGL01000284
182267
Bacteroidota
GTT
Asn
>WENV183495172
OMGL01000284
182267
Bacteroidota
GTT
Asn
>WENV183495883
OMGL01026097
20449
Bacteroidota
GGA
Ser
>WENV183495169
OMGL01000284
56072
Bacteroidota
TAA
Leu
>WENV183495010
OMGL01000020
99847
Bacteroidota
GTA
Tyr
>WENV183495033
OMGL01000046
99847
Bacteroidota
GTA
Tyr
>WENV183495860
OMGL01020059
399200
Bacteroidota
CAT
Met
>WENV183495300
OMGL01000750
186874
Bacteroidota
CAT
Met
>WENV183495153
OMGL01000210
178179
Bacteroidota
GGC
Ala
>WENV183495014
OMGL01000024
488746
Bacteroidota
CTG
Gln
>WENV183495489
OMGL01002311
488746
Bacteroidota
CTG
Gln
>WENV183495675
OMGL01006974
280478
Bacteroidota
GCC
Gly
>WENV183495015
OMGL01000024
20766
Bacteroidota
GGA
Ser
>WENV183495621
OMGL01004946
186108
Bacteroidota
GTT
Asn
>WENV183495622
OMGL01004946
186108
Bacteroidota
GTT
Asn
>WENV183495876
OMGL01023935
183889
Bacteroidota
GGC
Ala
>WENV183495055
OMGL01000063
158068
Bacteroidota
GGG
Pro
>WENV183495150
OMGL01000199
158068
Bacteroidota
GGG
Pro
>WENV183495841
OMGL01017566
186142
Bacteroidota
GAT
Ile
>WENV183495099
OMGL01000114
398828
Bacteroidota
CCG
Arg
>WENV183495359
OMGL01001022
398828
Bacteroidota
CCG
Arg
>WENV183495549
OMGL01003348
74084
Bacteroidota
CAG
Leu
>WENV183495789
OMGL01013017
480325
Bacteroidota
CTG
Gln
>WENV183495891
OMGL01027276
176192
Bacteroidota
TCT
Arg
>WENV183495325
OMGL01000807
280446
Bacteroidota
TTT
Lys
>WENV183495189
OMGL01000315
484496
Bacteroidota
TTG
Gln
>WENV183495842
OMGL01017566
186143
Bacteroidota
TGC
Ala
>WENV183494988
OMGL01000001
365112
Bacteroidota
TTT
Lys
>WENV183495079
OMGL01000079
365112
Bacteroidota
TTT
Lys
>WENV183495213
OMGL01000379
365112
Bacteroidota
TTT
Lys
>WENV183495317
OMGL01000780
365112
Bacteroidota
TTT
Lys
>WENV183495064
OMGL01000067
398836
Bacteroidota
GCA
Cys
>WENV183495065
OMGL01000067
398836
Bacteroidota
GCA
Cys
>WENV183495143
OMGL01000187
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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