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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183498017
OMGO01000103
117741
Bacteroidota
TAG
Leu
>WENV183497905
OMGO01000017
398829
Bacteroidota
CCT
Arg
>WENV183497904
OMGO01000015
404226
Bacteroidota
CCT
Arg
>WENV183498008
OMGO01000093
175904
Bacteroidota
CGG
Pro
>WENV183497872
OMGO01000002
289031
Bacteroidota
CAT
Met
>WENV183497970
OMGO01000067
280553
Bacteroidota
TTT
Lys
>WENV183498025
OMGO01000110
280553
Bacteroidota
TTT
Lys
>WENV183497943
OMGO01000043
280557
Bacteroidota
CAT
Met
>WENV183498373
OMGO01015209
20492
Bacteroidota
GGA
Ser
>WENV183498030
OMGO01000115
20206
Bacteroidota
GGA
Ser
>WENV183498084
OMGO01000194
483416
Bacteroidota
CTG
Gln
>WENV183497902
OMGO01000015
398871
Bacteroidota
TTC
Glu
>WENV183497903
OMGO01000015
398871
Bacteroidota
TTC
Glu
>WENV183498050
OMGO01000137
56493
Bacteroidota
TGA
Ser
>WENV183498056
OMGO01000144
175906
Bacteroidota
GTG
His
>WENV183498057
OMGO01000144
175906
Bacteroidota
GTG
His
>WENV183498014
OMGO01000098
175903
Bacteroidota
GTG
His
>WENV183497925
OMGO01000033
351598
Bacteroidota
CGG
Pro
>WENV183498155
OMGO01000588
351598
Bacteroidota
CGG
Pro
>WENV183498160
OMGO01000653
351598
Bacteroidota
CGG
Pro
>WENV183498167
OMGO01000690
118089
Bacteroidota
TAG
Leu
>WENV183498009
OMGO01000093
280530
Bacteroidota
CCA
Trp
>WENV183498225
OMGO01001682
280530
Bacteroidota
CCA
Trp
>WENV183498379
OMGO01016737
280530
Bacteroidota
CCA
Trp
>WENV183498067
OMGO01000164
203954
Bacteroidota
GTC
Asp
>WENV183498003
OMGO01000089
178907
Bacteroidota
TCT
Arg
>WENV183497881
OMGO01000004
405877
Bacteroidota
GGT
Thr
>WENV183498109
OMGO01000245
182267
Bacteroidota
GTT
Asn
>WENV183498113
OMGO01000263
20449
Bacteroidota
GGA
Ser
>WENV183497910
OMGO01000020
21127
Bacteroidota
GGA
Ser
>WENV183498184
OMGO01000872
57807
Bacteroidota
TGA
Ser
>WENV183498138
OMGO01000459
175886
Bacteroidota
GGC
Ala
>WENV183498004
OMGO01000091
175902
Bacteroidota
GGC
Ala
>WENV183498070
OMGO01000170
179697
Bacteroidota
TGT
Thr
>WENV183498088
OMGO01000201
280451
Bacteroidota
CGT
Thr
>WENV183498174
OMGO01000737
418894
Bacteroidota
TTC
Glu
>WENV183498018
OMGO01000105
99847
Bacteroidota
GTA
Tyr
>WENV183497979
OMGO01000073
399200
Bacteroidota
CAT
Met
>WENV183498053
OMGO01000138
399200
Bacteroidota
CAT
Met
>WENV183498244
OMGO01002607
399200
Bacteroidota
CAT
Met
>WENV183497867
OMGO01000002
186874
Bacteroidota
CAT
Met
>WENV183498117
OMGO01000272
332896
Bacteroidota
TTT
Lys
>WENV183498029
OMGO01000115
488746
Bacteroidota
CTG
Gln
>WENV183498038
OMGO01000123
280478
Bacteroidota
GCC
Gly
>WENV183498090
OMGO01000205
175844
Bacteroidota
GGC
Ala
>WENV183498127
OMGO01000355
175844
Bacteroidota
GGC
Ala
>WENV183498115
OMGO01000269
73011
Bacteroidota
CAA
Leu
>WENV183498166
OMGO01000684
73011
Bacteroidota
CAA
Leu
>WENV183498147
OMGO01000513
280515
Bacteroidota
CCA
Trp
>WENV183497964
OMGO01000061
158068
Bacteroidota
GGG
Pro
>WENV183498055
OMGO01000143
398828
Bacteroidota
CCG
Arg
>WENV183498039
OMGO01000123
74084
Bacteroidota
CAG
Leu
>WENV183498121
OMGO01000331
74084
Bacteroidota
CAG
Leu
>WENV183497999
OMGO01000082
480325
Bacteroidota
CTG
Gln
>WENV183498215
OMGO01001476
480325
Bacteroidota
CTG
Gln
>WENV183498093
OMGO01000209
176192
Bacteroidota
TCT
Arg
>WENV183498224
OMGO01001682
400088
Bacteroidota
GGT
Thr
>WENV183497918
OMGO01000025
280446
Bacteroidota
TTT
Lys
>WENV183497965
OMGO01000061
280446
Bacteroidota
TTT
Lys
>WENV183498054
OMGO01000142
484496
Bacteroidota
TTG
Gln
>WENV183498183
OMGO01000812
484496
Bacteroidota
TTG
Gln
>WENV183498110
OMGO01000251
285750
Bacteroidota
CCC
Gly
>WENV183498250
OMGO01003129
416636
Bacteroidota
TTC
Glu
>WENV183498000
OMGO01000084
398836
Bacteroidota
GCA
Cys
>WENV183498096
OMGO01000223
398836
Bacteroidota
GCA
Cys
>WENV183498161
OMGO01000670
398836
Bacteroidota
GCA
Cys
>WENV183498211
OMGO01001308
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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