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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183498670
OMGP01000233
117741
Bacteroidota
TAG
Leu
>WENV183498569
OMGP01000070
398829
Bacteroidota
CCT
Arg
>WENV183499156
OMGP01002928
175904
Bacteroidota
CGG
Pro
>WENV183498731
OMGP01000369
289031
Bacteroidota
CAT
Met
>WENV183498647
OMGP01000196
280553
Bacteroidota
TTT
Lys
>WENV183498572
OMGP01000073
280557
Bacteroidota
CAT
Met
>WENV183499414
OMGP01029774
20492
Bacteroidota
GGA
Ser
>WENV183498680
OMGP01000247
20206
Bacteroidota
GGA
Ser
>WENV183498638
OMGP01000174
483416
Bacteroidota
CTG
Gln
>WENV183498509
OMGP01000028
56493
Bacteroidota
TGA
Ser
>WENV183499082
OMGP01002146
56493
Bacteroidota
TGA
Ser
>WENV183499161
OMGP01003159
56493
Bacteroidota
TGA
Ser
>WENV183498510
OMGP01000028
175903
Bacteroidota
GTG
His
>WENV183498789
OMGP01000524
351598
Bacteroidota
CGG
Pro
>WENV183498863
OMGP01000776
351598
Bacteroidota
CGG
Pro
>WENV183498586
OMGP01000099
118089
Bacteroidota
TAG
Leu
>WENV183499287
OMGP01007877
175936
Bacteroidota
CAT
Met
>WENV183498802
OMGP01000587
203954
Bacteroidota
GTC
Asp
>WENV183499244
OMGP01005450
405877
Bacteroidota
GGT
Thr
>WENV183499280
OMGP01007322
29791
Bacteroidota
GCT
Ser
>WENV183498467
OMGP01000002
182267
Bacteroidota
GTT
Asn
>WENV183498909
OMGP01000946
21127
Bacteroidota
GGA
Ser
>WENV183498875
OMGP01000804
56072
Bacteroidota
TAA
Leu
>WENV183498594
OMGP01000115
57807
Bacteroidota
TGA
Ser
>WENV183498881
OMGP01000840
57807
Bacteroidota
TGA
Ser
>WENV183499307
OMGP01009161
57807
Bacteroidota
TGA
Ser
>WENV183499046
OMGP01001775
175886
Bacteroidota
GGC
Ala
>WENV183498650
OMGP01000203
175902
Bacteroidota
GGC
Ala
>WENV183498590
OMGP01000110
179697
Bacteroidota
TGT
Thr
>WENV183499281
OMGP01007322
398860
Bacteroidota
CTC
Glu
>WENV183499224
OMGP01004717
480404
Bacteroidota
TTG
Gln
>WENV183498538
OMGP01000046
280451
Bacteroidota
CGT
Thr
>WENV183498697
OMGP01000293
418894
Bacteroidota
TTC
Glu
>WENV183498698
OMGP01000293
418894
Bacteroidota
TTC
Glu
>WENV183498636
OMGP01000168
99847
Bacteroidota
GTA
Tyr
>WENV183498929
OMGP01001018
399200
Bacteroidota
CAT
Met
>WENV183498930
OMGP01001018
399200
Bacteroidota
CAT
Met
>WENV183499159
OMGP01002945
186874
Bacteroidota
CAT
Met
>WENV183498980
OMGP01001333
332896
Bacteroidota
TTT
Lys
>WENV183498987
OMGP01001392
332896
Bacteroidota
TTT
Lys
>WENV183498679
OMGP01000247
488746
Bacteroidota
CTG
Gln
>WENV183499203
OMGP01004053
399026
Bacteroidota
CCT
Arg
>WENV183498736
OMGP01000381
280478
Bacteroidota
GCC
Gly
>WENV183498889
OMGP01000865
280478
Bacteroidota
GCC
Gly
>WENV183498891
OMGP01000865
280478
Bacteroidota
GCC
Gly
>WENV183499187
OMGP01003622
280532
Bacteroidota
>WENV183499172
OMGP01003310
229246
Bacteroidota
GGC
Ala
>WENV183498665
OMGP01000225
280515
Bacteroidota
CCA
Trp
>WENV183499316
OMGP01010064
158068
Bacteroidota
GGG
Pro
>WENV183498766
OMGP01000454
398828
Bacteroidota
CCG
Arg
>WENV183498777
OMGP01000488
398828
Bacteroidota
CCG
Arg
>WENV183498490
OMGP01000017
176192
Bacteroidota
TCT
Arg
>WENV183498600
OMGP01000121
400088
Bacteroidota
GGT
Thr
>WENV183498472
OMGP01000005
280446
Bacteroidota
TTT
Lys
>WENV183498471
OMGP01000004
484496
Bacteroidota
TTG
Gln
>WENV183499079
OMGP01002105
285750
Bacteroidota
CCC
Gly
>WENV183499273
OMGP01006757
117804
Bacteroidota
TAG
Leu
>WENV183498652
OMGP01000208
398836
Bacteroidota
GCA
Cys
>WENV183498883
OMGP01000844
398836
Bacteroidota
GCA
Cys
>WENV183498993
OMGP01001434
398836
Bacteroidota
GCA
Cys
>WENV183499217
OMGP01004535
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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