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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183499728
OMGQ01000180
117741
Bacteroidota
TAG
Leu
>WENV183499556
OMGQ01000040
398829
Bacteroidota
CCT
Arg
>WENV183500194
OMGQ01003139
398829
Bacteroidota
CCT
Arg
>WENV183499819
OMGQ01000317
175838
Bacteroidota
GTT
Asn
>WENV183499505
OMGQ01000016
404226
Bacteroidota
CCT
Arg
>WENV183499709
OMGQ01000158
175904
Bacteroidota
CGG
Pro
>WENV183499440
OMGQ01000001
289031
Bacteroidota
CAT
Met
>WENV183499619
OMGQ01000082
280557
Bacteroidota
CAT
Met
>WENV183500539
OMGQ01026950
20492
Bacteroidota
GGA
Ser
>WENV183499866
OMGQ01000384
20206
Bacteroidota
GGA
Ser
>WENV183499705
OMGQ01000155
483416
Bacteroidota
CTG
Gln
>WENV183499508
OMGQ01000016
398871
Bacteroidota
TTC
Glu
>WENV183499635
OMGQ01000101
175906
Bacteroidota
GTG
His
>WENV183499726
OMGQ01000175
175903
Bacteroidota
GTG
His
>WENV183499601
OMGQ01000068
351598
Bacteroidota
CGG
Pro
>WENV183500072
OMGQ01001468
118089
Bacteroidota
TAG
Leu
>WENV183499850
OMGQ01000353
398872
Bacteroidota
GGT
Thr
>WENV183499710
OMGQ01000158
280530
Bacteroidota
CCA
Trp
>WENV183499904
OMGQ01000499
280530
Bacteroidota
CCA
Trp
>WENV183499754
OMGQ01000214
203954
Bacteroidota
GTC
Asp
>WENV183499593
OMGQ01000062
178907
Bacteroidota
TCT
Arg
>WENV183499483
OMGQ01000009
405877
Bacteroidota
GGT
Thr
>WENV183499801
OMGQ01000282
20449
Bacteroidota
GGA
Ser
>WENV183499570
OMGQ01000048
21127
Bacteroidota
GGA
Ser
>WENV183499545
OMGQ01000032
57807
Bacteroidota
TGA
Ser
>WENV183499622
OMGQ01000089
175902
Bacteroidota
GGC
Ala
>WENV183500131
OMGQ01001951
280451
Bacteroidota
CGT
Thr
>WENV183499596
OMGQ01000064
99847
Bacteroidota
GTA
Tyr
>WENV183500400
OMGQ01010020
99847
Bacteroidota
GTA
Tyr
>WENV183499679
OMGQ01000130
399200
Bacteroidota
CAT
Met
>WENV183499772
OMGQ01000235
399200
Bacteroidota
CAT
Met
>WENV183499435
OMGQ01000001
186874
Bacteroidota
CAT
Met
>WENV183499865
OMGQ01000384
488746
Bacteroidota
CTG
Gln
>WENV183499506
OMGQ01000016
280478
Bacteroidota
GCC
Gly
>WENV183500602
OMGQ01041639
175844
Bacteroidota
GGC
Ala
>WENV183499897
OMGQ01000483
73011
Bacteroidota
CAA
Leu
>WENV183499776
OMGQ01000247
398828
Bacteroidota
CCG
Arg
>WENV183499800
OMGQ01000282
74084
Bacteroidota
CAG
Leu
>WENV183499663
OMGQ01000123
480325
Bacteroidota
CTG
Gln
>WENV183499839
OMGQ01000344
176192
Bacteroidota
TCT
Arg
>WENV183499600
OMGQ01000066
280446
Bacteroidota
TTT
Lys
>WENV183499911
OMGQ01000516
280446
Bacteroidota
TTT
Lys
>WENV183499739
OMGQ01000198
484496
Bacteroidota
TTG
Gln
>WENV183500027
OMGQ01001148
484496
Bacteroidota
TTG
Gln
>WENV183499594
OMGQ01000062
285750
Bacteroidota
CCC
Gly
>WENV183500219
OMGQ01003814
365112
Bacteroidota
TTT
Lys
>WENV183499861
OMGQ01000381
398836
Bacteroidota
GCA
Cys
>WENV183500064
OMGQ01001382
398836
Bacteroidota
GCA
Cys
>WENV183500192
OMGQ01003127
398836
Bacteroidota
GCA
Cys
>WENV183499515
OMGQ01000020
170323
Bacteroidota
GGG
Pro
>WENV183499599
OMGQ01000066
170323
Bacteroidota
GGG
Pro
>WENV183499962
OMGQ01000754
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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